Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02635 ATGAACCTCACTGGATTCTCTTACTGCTTACTCTCACACCAGTTCGACGAATCGCCGGAATCCAGCGACCTCGTCTTGCACACTTCCTCCTCCGACAGGAAAAGAACAAACGGCGTCAGCTACACGCCTTTCCGGAAAAACCCGTCGAGCAAAAACCCCGCGTTCGGTGCTTACTATTACCTTACTCTCAGGAGAATCGTCGTTGGGGAGAAGCGCGTGCGGGTTCCGAAGAGGCTCCTAGAGCCTGACGTTGACGGTAACGGTGGGACTATCGTGGACTCGGGGTCCACCTTCACGTTCATGGAAAGGCCGATTTTTGATTTGGTGGCACAAGAGTTTGCGAAGCAGGTGAACTACACGCGCGCGAGGGAGGTGGAGAAACAATCCGGGCTGAGTCCGTGCTTTGTGGTGTCTGGAACGGCGTCGTTTCCGGAGCTCCGGTTTGAGTTCAGGGGCGGCGCGAAGATGAGTCAGCCTCTGACGAATTATTTTTCGTTGGTCGGGAAATCCGACGTGGCGTGTTTGACTATTGTGTCTGATGATGACGTGTCGGGTGGGCCCTCTGTGATATTGGGGAACTATCAGCAGCAGAATTTCTACGTTGAGTATGACTTGAGAAACGAGAGGTTCGGGTTTCGGAGTCAGAGTTGCAAAACGCGCGTTTAA 666 0.5345 MNLTGFSYCLLSHQFDESPESSDLVLHTSSSDRKRTNGVSYTPFRKNPSSKNPAFGAYYYLTLRRIVVGEKRVRVPKRLLEPDVDGNGGTIVDSGSTFTFMERPIFDLVAQEFAKQVNYTRAREVEKQSGLSPCFVVSGTASFPELRFEFRGGAKMSQPLTNYFSLVGKSDVACLTIVSDDDVSGGPSVILGNYQQQNFYVEYDLRNERFGFRSQSCKTRV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02635 221 Gene3D Acid Proteases 26 221 IPR021109 -
Vian3g02635 221 Pfam Xylanase inhibitor C-terminal 59 213 IPR032799 -
Vian3g02635 221 PANTHER OS07G0603500 PROTEIN-RELATED 6 217 - -
Vian3g02635 221 FunFam Aspartyl protease family protein 30 220 - -
Vian3g02635 221 ProSiteProfiles Peptidase family A1 domain profile. 1 213 IPR033121 -
Vian3g02635 221 MobiDBLite consensus disorder prediction 23 45 - -
Vian3g02635 221 SUPERFAMILY Acid proteases 6 217 IPR021109 -
Vian3g02635 221 CDD pepsin_A_like_plant 6 217 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02635 Vian-Chr3 40932296 40932961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02635 - - gmx:100810876 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02635 3 40932296 40932961 Vian3g02635 3 40932296 40932961 ECH
Vian2g02546 2 46137382 46138779 Vian3g02635 3 40932296 40932961 PCT