Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02539 ATGAGGATCCGTAAGAGGCAAGTGCCTTTCCCTCTATTGCCGGTGACTCACTCAGATCCCAACCTGATCAACCGGTCACCGGTGATGGTGCAACTCAACGATGCCATCACCACCTCACTCCACCCTTCTTGCACTTTTGGTTCGGCTGCTGCACCCTCTTTCCTCTTGGATCCCTCTCAGCCGTCCGATCAGCCTCTCGCTCCGATCGGAAAACCCACCAACGGCTCTGATGAGTACTCTGGAGAAGGAGAGACACAGAACTTGAGGCAGCAGCGCAAGAAGCAAGGAGACTCTTTGATGGAAGATGAGAGAAGGGAAGAAGAAGGAAGGGGACATAAGGGTAATGATACCAGGAAAGGAAGAATCTCGTGGTCTGAGACAGTTTCATCTTCAAGCCCTCCTAAACAAGATGGGAGATGGAGCGAGGGAGATAAAGCTTTCCCACCCAAGAAACGAAGAGGGACCTTCGAGAATGCAACAGAGGATAACAGCAACGATGAGGAGGAAAATGATGATGATGATAAGAAGAGTTCGAAGATGAAGATGAAGAGAATGAAGACAAAGATGAACAGGAAGTGTTCGAGGCGAGGTGACAGTAACAAGGAAGGAGGAGAAGAAGAAGAAGAAGATGATGATGATGATGAGTACGAAGAAGAGGTGACAAGAGAAACGAAAGCCGAAGTGCATGTTGGTAAGAAGAGGGTAAGGGGTGGTGCACTAATGGAAGGTTCAAGGTGCAGTCGTGTGAATGGGAGAGGATGGAGGTGTTGTCAACAAACCTTGGTGGGTTACTCTCTCTGCGAGCATCACTTGGGGAAGGGAAGGTTGAGGAGCATGACGAGTGTGAGAAACAAGTCCATTGGCACAACCAGTGGTGCACCAAAGAGCAGCATGCCAAAGTCTGAGTCTTCCTTAGAGAAGCAAACTGCAAAGCCTAGCAGTTTCACCGAAGACCCTTTGGGAAAAGATGCTGAAAACAACGATGAGAAGAAGCCAGTGATTGTCACAAAGAGGAGGATGAAGCTTGGAATGGTGAAAGCTCGATCCATAAGCAGCTTGCTGGGACAGTCAAACACTGAAATTGTTGCCATAGCTGAGGATAGTGATAACAAGTAA 1116 0.4848 MRIRKRQVPFPLLPVTHSDPNLINRSPVMVQLNDAITTSLHPSCTFGSAAAPSFLLDPSQPSDQPLAPIGKPTNGSDEYSGEGETQNLRQQRKKQGDSLMEDERREEEGRGHKGNDTRKGRISWSETVSSSSPPKQDGRWSEGDKAFPPKKRRGTFENATEDNSNDEEENDDDDKKSSKMKMKRMKTKMNRKCSRRGDSNKEGGEEEEEDDDDDEYEEEVTRETKAEVHVGKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTTSGAPKSSMPKSESSLEKQTAKPSSFTEDPLGKDAENNDEKKPVIVTKRRMKLGMVKARSISSLLGQSNTEIVAIAEDSDNK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02539 371 MobiDBLite consensus disorder prediction 321 335 - -
Vian3g02539 371 PANTHER EXPRESSED PROTEIN-RELATED 102 354 - -
Vian3g02539 371 MobiDBLite consensus disorder prediction 203 220 - -
Vian3g02539 371 MobiDBLite consensus disorder prediction 55 236 - -
Vian3g02539 371 MobiDBLite consensus disorder prediction 278 335 - -
Vian3g02539 371 Pfam WRC 242 282 IPR014977 -
Vian3g02539 371 MobiDBLite consensus disorder prediction 221 236 - -
Vian3g02539 371 MobiDBLite consensus disorder prediction 138 160 - -
Vian3g02539 371 ProSiteProfiles WRC domain profile. 240 284 IPR014977 -
Vian3g02539 371 MobiDBLite consensus disorder prediction 279 315 - -
Vian3g02539 371 MobiDBLite consensus disorder prediction 87 120 - -
Vian3g02539 371 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02539 Vian-Chr3 39519644 39521909 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02539 - - gmx:102665471 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02539 3 39519644 39521909 Vian3g02539 3 39519644 39521909 ECH
Vian2g02021 2 39864121 39866055 Vian3g02539 3 39519644 39521909 PCT