Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02021 ATGAGGATCCGGAAAAGGCCGGTGCTTTTCCCGTCGTCGGTCTCGCCGTTGCCTCTGTCAGATCCACACCTGATCAGCCGGTCGCCGGTGGTGGTGCAACTAAGCGAGGCTGCTTCCACGGCAGCGAAACGTCCTTCTTCTCCTTCTTCTGCAGTGCTCCATCGCCATGCTGGTTCGTGGAGCTTGGATCGTTGCCAGCCATCTGATCAGTCTCTCCCTTCGATCGGGAAGCCAAGCAACGGCTGGGATGATCCCTCCGGCATCGGTGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGAGGAGGTTATTGTTGGAAGGGAAGAAAGTGGAGAAGACTCCGGAGAGAAGGGTAATCATACCAGGAAAGGACGCAACTTGGGTTTGGAAACTCTAGCCGGGGTGGTGTCACCGTTAAGCCCTTCTTCTACTCAAGACAGATGGTACGAGGAAGAGAAAGTTATTCCGCTGAAGAAAAGGAGAGGGGCATTCGAGGAGAATAATACTGCTGCCACCCATAGCAGGAAGACGAAGGCGAAGATGAAGACGAAGATGAACAAGAAGTGTTCCTCTCGCAACGAGGATAGCACGGAAGAGGAAAATGAAGAAGAAACGAAAGTGGATGATGTAAACGTGAATGTGAGTAAGAAGAGGGTAAGGGGTAGTGCACTCATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGGAGGGGATGGAGGTGCTGTCAGCAAACTCTGGTTGGTTACTCGCTGTGTGAGCATCACTTGGGGAAGGGAAGACTCAGAAGCATGACAAGTGTTAGAAGCCGTTCCATTGCATCAACTGCACCAAAGAAGGTGCACGTACACCCCCACCATTCTTCTTCTTCTTCTTCTTCTTCTCTAGAGAAGCAAAATACGAGTGTTGATGAGCCCTTTGGGGAGGAGGAGGAGGAGAAGAAGCCGGAGATAATCACGAAGAAGAGGATGAAGCTGGGCGTTGTAAAAGCGCGTTCCATAAGCAGCTTGCTAGGACAAACCAACACCCAGATTGCTGCTGTAGCTCATGAGAATAGCAAGTAA 1068 0.5131 MRIRKRPVLFPSSVSPLPLSDPHLISRSPVVVQLSEAASTAAKRPSSPSSAVLHRHAGSWSLDRCQPSDQSLPSIGKPSNGWDDPSGIGESGAHRQHNKQDPLEEVIVGREESGEDSGEKGNHTRKGRNLGLETLAGVVSPLSPSSTQDRWYEEEKVIPLKKRRGAFEENNTAATHSRKTKAKMKTKMNKKCSSRNEDSTEEENEEETKVDDVNVNVSKKRVRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAPKKVHVHPHHSSSSSSSSLEKQNTSVDEPFGEEEEEKKPEIITKKRMKLGVVKARSISSLLGQTNTQIAAVAHENSK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02021 355 MobiDBLite consensus disorder prediction 167 211 - -
Vian2g02021 355 MobiDBLite consensus disorder prediction 288 303 - -
Vian2g02021 355 MobiDBLite consensus disorder prediction 63 77 - -
Vian2g02021 355 MobiDBLite consensus disorder prediction 304 322 - -
Vian2g02021 355 MobiDBLite consensus disorder prediction 94 127 - -
Vian2g02021 355 MobiDBLite consensus disorder prediction 263 322 - -
Vian2g02021 355 ProSiteProfiles WRC domain profile. 227 271 IPR014977 -
Vian2g02021 355 MobiDBLite consensus disorder prediction 40 151 - -
Vian2g02021 355 MobiDBLite consensus disorder prediction 1 23 - -
Vian2g02021 355 Pfam WRC 229 269 IPR014977 -
Vian2g02021 355 PANTHER EXPRESSED PROTEIN-RELATED 109 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02021 Vian-Chr2 39864121 39866055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02021 - - gmx:100810559 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02021 2 39864121 39866055 Vian2g02021 2 39864121 39866055 ECH
Vian2g02021 2 39864121 39866055 Vian3g02539 3 39519644 39521909 PCT