Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02535 ATGGATTCTTCTTCTGACCACTCTCCTTCGTCATCTCTTCATTCTACTGGAGATGTTCAAAACGTTAAGTTCTGTCAGTGGTGTGGTGGTCCAACGAAGCCTGGAATACCTGAAGGAGAAGAAAGATTCAGAGCTATATGTACCAGCTGTGGGAAGATTGCATATCAGAATCCAAAAATGGTAGTCGGTTGCCTCATTGAACACGATAACAAGGTCCTCCTTTGCAAGAGGAAGATTGAACCGTCTTATGGCCTATGGACACTTCCTGCTGGTTATCTAGAAATGGGAGAGTCAGCTAGGGAAGGTGCCATCAGGGAAACGAGGGAAGAAGCCAATGCTGAGGTAGAAGTGATTTCCCCCTTTGCTCAATTAGACATTCCTTTAATTGGCCAGACTTATATAATCTTCTTAGCAAGGTTGAAGAACCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAGCTTTTCCCTCTCGATGAAATACCTTTCAACTCTCTATCCTTTTCATCAATGGTGGTCACTTTAAGTTTGTATGTTGAAGATAAGAAGGCAGGAGGAAAGCCTAAATTCCATTATGGTACTATTAACAAAAGGCCTGGTACCAGTGCTTCTGACATTCATGCCTATACACTGGACCATCATATGCAGTCATGA 657 0.4307 MDSSSDHSPSSSLHSTGDVQNVKFCQWCGGPTKPGIPEGEERFRAICTSCGKIAYQNPKMVVGCLIEHDNKVLLCKRKIEPSYGLWTLPAGYLEMGESAREGAIRETREEANAEVEVISPFAQLDIPLIGQTYIIFLARLKNPHFSPGPESSECQLFPLDEIPFNSLSFSSMVVTLSLYVEDKKAGGKPKFHYGTINKRPGTSASDIHAYTLDHHMQS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02535 218 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 57 209 - -
Vian3g02535 218 Gene3D - 20 56 - -
Vian3g02535 218 ProSiteProfiles Nudix hydrolase domain profile. 57 180 IPR000086 -
Vian3g02535 218 ProSitePatterns Nudix box signature. 91 112 IPR020084 GO:0016787
Vian3g02535 218 Pfam NUDIX domain 61 162 IPR000086 -
Vian3g02535 218 SUPERFAMILY Nudix 23 184 IPR015797 -
Vian3g02535 218 Pfam Nudix N-terminal 23 56 IPR029401 -
Vian3g02535 218 PANTHER NUDIX HYDROLASE 23 24 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02535 Vian-Chr3 39456912 39459785 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02535 K18453 - gmx:100777180 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02535 3 39456912 39459785 Vian3g02535 3 39456912 39459785 ECH
Vian2g02016 2 39813249 39817043 Vian3g02535 3 39456912 39459785 PCT