Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02016 ATGATGGTGAAGGGAATCCAGATTCAGATATGTGGATTGGTAAGTCAACGATGGATTCAGAAACCCCGGGCATTCTCATCCTTATCATTTTCCCCAATTCCACACCCGAACCCTTATTCCAAACTGCTTCCCACCAAAACCATCGTTCGTAGGGTTCGATTCGCGCCATTTCACGCTTCCTCGACACCGCTTCCTTCTGCCGGAAATGTTCGACACATTAAGTTCTGTCAGTGGTGTGGTGGTTCTACGAAGCATGATATTCCTGAAGGGGAAGAAAAGTTTAGAGCTATATGTACGGTTTGTGGGAAGATTGCGTATCAGAATCCGAAGATGGTAGTTGGCTGCCTCGTTGAACATGATAACAAGGTGCTCCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACACTTCCTGCTGGTTATTTGGAAATAGGAGAGTCGGCTGTGGATGGTGCCATAAGAGAAACAAGGGAGGAAGCAAATGCAGATGTGGAAGTAATTTCACCATTTGCCCAACTGGATATTCCTTTAATTGGCCAAATTTATTTGATATTCTTGGCGAAGCTGAAGAAGCCGCATTTTTCACCTGGTCCAGAATCATCAGCATGCCAACTTTTTCCACTTGACGATATACCTTTTAATTCTCTATCCTTTTCATCGATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGACCGGAAAACTCAAATTCCATTATGGAACCATTAACAAAAGGCCGGGTACAAGTCCTTCTGATATTCGGGCCTATACGCTGGATCATCATATGCAGTCATGA 807 0.4362 MMVKGIQIQICGLVSQRWIQKPRAFSSLSFSPIPHPNPYSKLLPTKTIVRRVRFAPFHASSTPLPSAGNVRHIKFCQWCGGSTKHDIPEGEEKFRAICTVCGKIAYQNPKMVVGCLVEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVDGAIRETREEANADVEVISPFAQLDIPLIGQIYLIFLAKLKKPHFSPGPESSACQLFPLDDIPFNSLSFSSMVVTLSLYVEDIKTGKLKFHYGTINKRPGTSPSDIRAYTLDHHMQS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02016 268 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 108 259 - -
Vian2g02016 268 Pfam Nudix N-terminal 74 107 IPR029401 -
Vian2g02016 268 PANTHER NUDIX HYDROLASE 23 75 262 - -
Vian2g02016 268 ProSitePatterns Nudix box signature. 142 163 IPR020084 GO:0016787
Vian2g02016 268 Gene3D - 71 107 - -
Vian2g02016 268 SUPERFAMILY Nudix 74 232 IPR015797 -
Vian2g02016 268 Pfam NUDIX domain 112 213 IPR000086 -
Vian2g02016 268 ProSiteProfiles Nudix hydrolase domain profile. 108 231 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02016 Vian-Chr2 39813249 39817043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02016 K18453 - gmx:100808417 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02016 2 39813249 39817043 Vian2g02016 2 39813249 39817043 ECH
Vian2g02016 2 39813249 39817043 Vian3g02535 3 39456912 39459785 PCT