Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02502 ATGGGTTGGAATCTCATCTTCTGGCTCCTCATTTGTTTCCCTGCCAACATTGCGCTTCTCGCTTCCACTTTCTACCAGGTTTTGATTCTGTCGGATTTGGAGTCTGATTACGTCAACCCTTTCGACGCTTCGTCTCGGATTAACTACTTCGTTCTTCCGGAGTTCATTGGGCAGGGAGCATTGTGTGCTCTGTGCCTCTTCACTGGCCATTGGTTCATGTTTTTGCTCACAGTTCCTGTTACTTGTTACCATGCCAGACTGTATGTGAAAAGAGAGCATCTGATTGATGTTACTGAGGTATTTAGGGTAGTTAATGCTGAGAAGAAATTTCGGATAGTCAAACTTGCTTTATACTTAACGGTTCTCATTGTTACTATCTTCAGGATGCTTGCCGCAGGAACAATAATATTCTACAATTCCAAGTTCCAAGAATTAGACATACGGTCAAATCTCTAG 456 0.4276 MGWNLIFWLLICFPANIALLASTFYQVLILSDLESDYVNPFDASSRINYFVLPEFIGQGALCALCLFTGHWFMFLLTVPVTCYHARLYVKREHLIDVTEVFRVVNAEKKFRIVKLALYLTVLIVTIFRMLAAGTIIFYNSKFQELDIRSNL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02502 151 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Vian3g02502 151 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Vian3g02502 151 PANTHER CORNICHON-RELATED 7 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02502 Vian-Chr3 38961814 38966684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02502 K20368 - gmx:100500341 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02502 3 38961814 38966684 Vian3g02502 3 38961814 38966684 ECH
Vian2g01980 2 39424735 39432251 Vian3g02502 3 38961814 38966684 PCT