Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02476 ATGGGAGAAGCACCTATCATTATTGGTCAAGACCTGCAGAATGGGAATGACAATGACTTTAAATCAAAAAGTGGGACTTTTGAAACAAGCACTATCATTGGTGAAAAAAAGTATGTCATTGGTGGAACTTCTGGTGAAACTTTTTATGTGAAAGTTCAAATTCTTGACAACAACTGTCTTGGGGAATGGGTTAATGTGGTTGAGCTAGGCACTAAACCCATTTCATGTAATGGCCACTCAGCCGTGCTTTTGAAAGACAGAATACTAATTCTTAAGAAAAATTCTAACCCAGATGACTGTATATGGTTTCTGGAGGTGGACACTACATATGTCAGGCAGCAGCAGAAAAAAAATTTGGGGACTGAGGTTGTAGCATGGAGTAAGGGTGTGATAGGAAACGTGGAGAAACCTGTTGTTATAAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCTCTCCTCATGAAGGAATTCCCCTCTATGTTTGGCTTTTCTGTGAGCCACACAACCCGTGCCCCGAGAGGCATGGAGAAAGATGGGGTCCATTACCATTTTACGGAGAAGAATGTTATGGAGAAAGAGATTAAAGATGGCAAGTTTCTGGAGTTTGCTTCTGTCCATGGAAATCTCTATGGGACCAGTGTTGAGGCTGTGGAGCTGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATCGATGTTCAAGGGGCAAGATCCGTGAGGGCTAGTCCTCTAGAAGCCATGTTCATCTTTATCTGCCCCCCATCAATGGACGAACTGGAGAAGCGTCTTCGTGACCGAGGGACTGAGACAGAAGAACAGGTCCTAAAGCGACTACGAAATGCTCAGGCTGAGATTGAGCAAGGGAGATCATCAGGCATATTTGATCACATCTTATTCAATGACAATCTTGAGGACTGTTATGAGAATCTGAAGAAATTATTGGGACTCAATGAATATGCCACTACTCCCAAGTCTGCACCAAAAGAGATAAATCTCCCAAGGGATCATTCGGTGTCAAAAATTGATGACAAAATCATCATAAATTCCACGTCTTCAAAACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGACGTGTCTTGTCTTAAAGGGGGTGCACCTGGACGGACAAGAGGACTTAATATAGAAGCCATTGACTCGTTTTCAGAAGGCTTCAATGGCAATGGGAATGGACCAATTTGA 1209 0.4227 MGEAPIIIGQDLQNGNDNDFKSKSGTFETSTIIGEKKYVIGGTSGETFYVKVQILDNNCLGEWVNVVELGTKPISCNGHSAVLLKDRILILKKNSNPDDCIWFLEVDTTYVRQQQKKNLGTEVVAWSKGVIGNVEKPVVISGPSGVGKGTLISLLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHGNLYGTSVEAVELVSDAGKRCILDIDVQGARSVRASPLEAMFIFICPPSMDELEKRLRDRGTETEEQVLKRLRNAQAEIEQGRSSGIFDHILFNDNLEDCYENLKKLLGLNEYATTPKSAPKEINLPRDHSVSKIDDKIIINSTSSKLEKESKNLIMLDVSCLKGGAPGRTRGLNIEAIDSFSEGFNGNGNGPI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02476 402 ProSiteProfiles Guanylate kinase-like domain profile. 135 317 IPR008144 -
Vian3g02476 402 CDD GMPK 137 313 - -
Vian3g02476 402 SMART gk_7 134 320 IPR008145 -
Vian3g02476 402 PANTHER GUANYLATE KINASE-RELATED 31 365 - -
Vian3g02476 402 NCBIfam guanylate kinase 136 316 IPR017665 GO:0004385|GO:0006163
Vian3g02476 402 FunFam Guanylate kinase 2 128 321 - -
Vian3g02476 402 Pfam Guanylate kinase 135 316 IPR008145 -
Vian3g02476 402 Gene3D - 132 325 IPR027417 -
Vian3g02476 402 SUPERFAMILY Galactose oxidase, central domain 24 113 IPR011043 -
Vian3g02476 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 316 IPR027417 -
Vian3g02476 402 ProSitePatterns Guanylate kinase-like signature. 170 187 IPR020590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02476 Vian-Chr3 38451147 38453880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02476 K00942 - gmx:100812658 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02476 3 38451147 38453880 Vian3g02476 3 38451147 38453880 ECH
Vian2g01959 2 39104307 39106424 Vian3g02476 3 38451147 38453880 PCT