Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01959 ATGGGAGAAGCACCAGCATTGCTTGTTGATGACCTGCAGGATGGGGCTCACAATGGCCTTGAATTGAAAAACGGAATTTGCAAAGCAACTGCTACCGTTGGTGATAAGACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAATCTTGGAGAATGGGTTCGTCCAACTGTGAGGGGCACCAAACCCGTATCGTGCAAAGGCCTTTCAGCAGTGGCTTTGGAAGACAAAATACTGATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGGTTGACACCCAATATGTTAGGCAGCAGCAAGAATATTTGGGGACTGAGGTGGTTGCATGGAGTAAAGGTGTGGTAGGAAATGCTGAGAAGCCTGTTGTAATTAGTGGTCCTTCTGGAGTAGGCAAAGGAACATTGATAGCAATGCTTATGAAGGAGTTTCCATCTATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCGAGAGGTATGGAGAAGGATGGGGTCCATTATCATTTTACTGAGAAGAGTATAATGGAGAAAGAAATCGAAGAGGGAAAGTTTCTTGAGTTTGCTTCTGTCCATGGTAATCTGTATGGAACAAGTGTTGAGGCTGTGGAACTGGTGGCAGATGCAGGGAAAAGATGCATTCTTGATATTGATGTTCAAGGTGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTGTATGTCCCCCGTCAATGGAGGAGCTGGAGAAGCGCCTTCGTGACCGAGGCACAGAGACTGAGGAACAGATCCTGAAGCGACTAAGGAATGCCGAGGCTGAGATTGAGCAAGGCAAATCTTCTCACATATTTGATTTCATCCTGTACAATGACAAACTTGTTGAGTCTTACGAGAAACTTAAGCCACGAAGATTAATTGACGTGTTTAATCTTGTCAATGGAGCAGGCCATGGAGAGATTGATCTACCAATTGACCATTCAGTGTCAAAAATTGATAACAAAATCATCATAAACCGCATCTCCTCGGGAGAGAAGGAATCAAAGAATTTGATCATATTAGATGTTTCCTCGCTAAAAGGAGGTGCACCTGGACGGACCAGAGGCCTAAATTTCCAAGCAATTGGCTCGTTCTCCAATGGCTTGACTGAGATAGAAGGACTTAGCTAA 1197 0.4419 MGEAPALLVDDLQDGAHNGLELKNGICKATATVGDKTYVIGGADDGTLSIEVQIFDRNLGEWVRPTVRGTKPVSCKGLSAVALEDKILILKKGSKPDDQIWFLEVDTQYVRQQQEYLGTEVVAWSKGVVGNAEKPVVISGPSGVGKGTLIAMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSIMEKEIEEGKFLEFASVHGNLYGTSVEAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAEAEIEQGKSSHIFDFILYNDKLVESYEKLKPRRLIDVFNLVNGAGHGEIDLPIDHSVSKIDNKIIINRISSGEKESKNLIILDVSSLKGGAPGRTRGLNFQAIGSFSNGLTEIEGLS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01959 398 Pfam Guanylate kinase 133 311 IPR008145 -
Vian2g01959 398 Coils Coil 271 291 - -
Vian2g01959 398 FunFam Guanylate kinase 2 126 317 - -
Vian2g01959 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 311 IPR027417 -
Vian2g01959 398 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Vian2g01959 398 Gene3D - 136 310 IPR027417 -
Vian2g01959 398 FunFam Guanylate kinase 1 165 224 - -
Vian2g01959 398 SUPERFAMILY Galactose oxidase, central domain 30 112 IPR011043 -
Vian2g01959 398 Gene3D Guanylate Kinase phosphate binding domain 165 224 - -
Vian2g01959 398 NCBIfam guanylate kinase 134 311 IPR017665 GO:0004385|GO:0006163
Vian2g01959 398 CDD GMPK 135 254 - -
Vian2g01959 398 SMART gk_7 132 318 IPR008145 -
Vian2g01959 398 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Vian2g01959 398 PANTHER GUANYLATE KINASE-RELATED 31 311 - -
Vian2g01959 398 Gene3D - 24 130 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01959 Vian-Chr2 39104307 39106424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01959 K00942 - gmx:100808931 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01959 2 39104307 39106424 Vian2g01959 2 39104307 39106424 ECH
Vian2g01959 2 39104307 39106424 Vian3g02476 3 38451147 38453880 PCT