Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02471 ATGCTGAATTATCAAACACCTTCCACAAGCCATGACAGAGAGGAGCAAAGCGACTACACTGATTATGAACAACAAATCAGAGAAATTCATGCCTTGACTCCACCCCCCAGAAGAGAGCCTAACTGGGAAACACACACACACAGCCACCACTCTTCTTCTGTGTCCATAGAAGGTGGTTCCAGCGAGAACTTCAGCGTGAGTAGGGAATTCAGTGCCCTGGTTCTAGCAGGCTCAAGTATTGATCACAACCCCACCACCCCTAGTCCCATGAGTGTGAATATGATGCATGGCAATGAAGGAGGTGGTAATAGCAGCATTAGCAACGACAACAACAATAGCAACAACTTGGGGAGGATTGGAGAGGATGAGTTGCTGATGATGGAAGAGACTAACCCTTTGGCTATTGTGGCAGATATCAACCCTTTGGGAGCTGATTCCTCATCATCACCTCCGAGGCGTGGAGGGAACTCTTCTTCTTCAGCTTCTGGTACTGCTCTGAGTGAGGTGACAGTGCAGAGGGTGAGAAAGGAGGAGGTTGAAGCAAAGATATCAGCTTGGCAAAACGCTAAGGTTGCTAAGATTAACAACAGGTTCAAGAGGGAAGATGCTGTTATAAATGGGTGGGAGAATGAGCAGGTTCAGAAAGCAACTTCGTGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAGAGCACTGGAGAAAATGCAAAATGAGATAGCAAAAGCTCACAGAAAAGCTGAGGAGAGGAAGGCATCAGCAGAGGCTAAAAGGGGCACAAAAGTAGCCAGGGTTCTGGAGATTGCCAACCTCATGAGAGCAGTTGGAAGAGCACCTACCAAAAGATCTTTCTTTTAA 864 0.4699 MLNYQTPSTSHDREEQSDYTDYEQQIREIHALTPPPRREPNWETHTHSHHSSSVSIEGGSSENFSVSREFSALVLAGSSIDHNPTTPSPMSVNMMHGNEGGGNSSISNDNNNSNNLGRIGEDELLMMEETNPLAIVADINPLGADSSSSPPRRGGNSSSSASGTALSEVTVQRVRKEEVEAKISAWQNAKVAKINNRFKREDAVINGWENEQVQKATSWMKKVERKLEEKRARALEKMQNEIAKAHRKAEERKASAEAKRGTKVARVLEIANLMRAVGRAPTKRSFF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02471 287 Pfam Remorin, C-terminal region 178 283 IPR005516 -
Vian3g02471 287 MobiDBLite consensus disorder prediction 11 25 - -
Vian3g02471 287 MobiDBLite consensus disorder prediction 141 171 - -
Vian3g02471 287 MobiDBLite consensus disorder prediction 96 117 - -
Vian3g02471 287 MobiDBLite consensus disorder prediction 142 169 - -
Vian3g02471 287 MobiDBLite consensus disorder prediction 1 60 - -
Vian3g02471 287 PANTHER OS02G0116800 PROTEIN 39 283 - -
Vian3g02471 287 Coils Coil 220 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02471 Vian-Chr3 38383288 38385344 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02471 - - vun:114191978 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01955 2 39018849 39020833 Vian3g02471 3 38383288 38385344 PCT