Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01955 ATGTTCAACGATCCATTAATCATGGGTTCAACGAGCCATGGCTCAGAGGATCATGAAGAAGACGATGAACAAGTTAGAGAAATCCATGCCTTAACACCAACTCACCCTCCCCACCCACGTGGCAGACCCTGGGACACCCTTCACACCCACTCCCTATCCGTCGCCAGCACCGACGGTGGCGCCTCCGACAACTTCACCACCATGAGCAGAGAGTTCAACGCCTTGGTTCTCGCAGGCTCCAACATCGACCCCGACAACAACCGCAACCTAACTCCCGTCAACCAAAACAACGTGAACAACAACCTGGGGAGGATCAGAGAAGATGAGTTGATGGAAGAGACGAACCCTCTGGCAATCGTGCCGGATAACCACCCTCTGGACCCGGTTCCCTCGTCCCAAATGGGTGGTGGTGGTGGTGCACGTGAAGAGCACGTGTCGGTGCAGAGGGTGAAGAAGGAGGAGGTGGATACGAAGATATCGGCGTGGCAGAACGCGAAGGTTGCGAAGATTAACAACAGGTTCAAGAGAGAAGACGCTGTGATCAATGGGTGGGAGAGCGAGCAGGTTCAGAAAGCTTCCTCTTGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGGGCAAGAGCAATGGAGAAAATGCAAAATGACATAGCAAAAGCTCATAGAAAAGCAGAGGAGAGAAGGGCATCAGCAGAAGCCAAAAGAGGAACGAAAGTGGCAAGGGTTTTGGAGATTGCAAGTCTCATGAGAGCAGTTGGAAGACCTCCTGCCAAAAAGTCCTTCTTCTAA 792 0.5189 MFNDPLIMGSTSHGSEDHEEDDEQVREIHALTPTHPPHPRGRPWDTLHTHSLSVASTDGGASDNFTTMSREFNALVLAGSNIDPDNNRNLTPVNQNNVNNNLGRIREDELMEETNPLAIVPDNHPLDPVPSSQMGGGGGAREEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01955 263 Coils Coil 196 231 - -
Vian2g01955 263 MobiDBLite consensus disorder prediction 212 235 - -
Vian2g01955 263 Pfam Remorin, C-terminal region 154 258 IPR005516 -
Vian2g01955 263 PANTHER OS02G0116800 PROTEIN 141 259 - -
Vian2g01955 263 MobiDBLite consensus disorder prediction 119 143 - -
Vian2g01955 263 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01955 Vian-Chr2 39018849 39020833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01955 - - gmx:100527684 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01955 2 39018849 39020833 Vian2g01955 2 39018849 39020833 ECH
Vian2g01955 2 39018849 39020833 Vian3g02471 3 38383288 38385344 PCT