Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02214 ATGGCAAGGGTGTCCACAGATCCACTAGCTATTGGGAGAGTCATAGGAGATGTTCTTGAGTCTTTCACTCCAAGCATAAAAATGACTGTAACATTCAGTAAGAAGCAAGTCCACAATGGCCATGAACTCATTCCTTCCACAGTTACCACATGCCCCAGGGTTGAGATTGGTGGAGAAGATTTGAGATCCTTCTTTACACTGATTATGACAGACCCTGATGTCCCAGGACCTAGTGACCCTTATCTGAGAGAACATCTGCACTGGATGGTGACAGACATACCAGGCACAACAAATGCCTCATTTGGGAAAGTGTTGGTGAGCTATGAAATGCCAAAGCCTAACATAGGGATACACAGGTTTGTGTTTGTCCTGTTCCAGCAAAAACGTAGGCAGTGTGTTACTCCACCCTCTTCCAGGGACAACTTTAACACTCGAAAATTCTCATCTGAGAACGACCTCGGCCTCCCTGTTGCTGCTGTCTACTTCAATGCACAGAGGGAAACTGCTGCAAGAAGACGCTAA 522 0.4617 MARVSTDPLAIGRVIGDVLESFTPSIKMTVTFSKKQVHNGHELIPSTVTTCPRVEIGGEDLRSFFTLIMTDPDVPGPSDPYLREHLHWMVTDIPGTTNASFGKVLVSYEMPKPNIGIHRFVFVLFQQKRRQCVTPPSSRDNFNTRKFSSENDLGLPVAAVYFNAQRETAARRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02214 173 Pfam Phosphatidylethanolamine-binding protein 52 162 IPR008914 -
Vian3g02214 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Vian3g02214 173 CDD PEBP_euk 27 164 IPR035810 -
Vian3g02214 173 Gene3D - 1 173 IPR036610 -
Vian3g02214 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 168 IPR035810 -
Vian3g02214 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Vian3g02214 173 FunFam Terminal flower 1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02214 Vian-Chr3 33209428 33210694 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02214 K06910 - gmx:100787529 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02485 2 45558396 45559625 Vian3g02214 3 33209428 33210694 PCT