Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02485 ATGGCAAGAATGCCTTTGGAACCTCTTATTGTGGGGAGAGTCATAGGAGAGGTTCTTGACTCTTTTACCACAACCACAAAAATGACTGTGAGTTATAACAAAAAGCAAGTCTACAATGGCCATGAGTTTTTCCCTTCATCTATCAACATCAAACCCAAGGTTGAGATTGAGGGTGATGATATGAGATCCTTTTTCACACTGATCATGACAGACCCTGATGTTCCAGGCCCTAGTGACCCTTATCTGAGAGAACACTTGCACTGGATAGTGACAGACATTCCAGGCACAACAGATGCTACATTTGGGAAAGAGTTGGTGAGCTATGAGATCCCAAAACCTAATATTGGGATCCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAGCGTAGGCAGTGTGTTACTCCACCAACTTCAAGGGATCAGTTCAACACACGCAATTTCGCAGCACAGAACGAGCTTGGGCTCCCAGTGGCTGCTGTCTACTTCAATGCACAGAGGGAAACGGCTGCAAGAAGACGCTAG 522 0.4521 MARMPLEPLIVGRVIGEVLDSFTTTTKMTVSYNKKQVYNGHEFFPSSINIKPKVEIEGDDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTPPTSRDQFNTRNFAAQNELGLPVAAVYFNAQRETAARRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02485 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Vian2g02485 173 Pfam Phosphatidylethanolamine-binding protein 48 162 IPR008914 -
Vian2g02485 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Vian2g02485 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 168 IPR035810 -
Vian2g02485 173 CDD PEBP_euk 26 164 IPR035810 -
Vian2g02485 173 Gene3D - 2 173 IPR036610 -
Vian2g02485 173 FunFam Terminal flower 1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02485 Vian-Chr2 45558396 45559625 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02485 K06910 - pvu:PHAVU_001G189200g 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02485 2 45558396 45559625 Vian2g02485 2 45558396 45559625 ECH
Vian2g02485 2 45558396 45559625 Vian3g02214 3 33209428 33210694 PCT