LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian3g02157	ATGGCATCGGGGCAACATCAGGATCGGGCTGAGGCAGCTTCGAAAATTGCTGCCAACGAGCTTGAACAAGCCAACAGAGAGAGAGTGCGTGATGTTGTGGGTGTTGTGGATGATGTCAGTGTTGTGGATAAGCAACACGATCAAGATCAAGAAAAGCGTGGTGTGATAGGGTCCATGTTAAGGGCGGTGCAAGAGGCAGTGGCTGGGAAGAAAGAATCAGTTCCTGCGAAAGCACACACCACAGAGGTGATTCATGATGTTAATTTCCAACCCGATGACGTGACTGCTGGGGAAGTGAGAGACATATCAGTAGCCAAGAATCCTGGGATCTACGATTCTTCAGCCACGGACGAAACCGGTTCCAAGGTTGGTGAATACGCAGATTATGCTGCCCAGAAGGCGAAGGAAACAAAGGATGCAGCAATGGAAAAAGCTGGTGAGTACACAGATTATGCTTCTCAGAAGGCGAAGGAAGCGAAGGACAAGACTATGGAGAAGGGTGGGGAGTATAAGGATTACGCTGCTGAGAAGGCTAAGGAAGGAAAAGATGCTACCCTGAATAAGATGGGAGAGTACAAGGACTACACTGCGGAGAAGACGAAAGAAGGGAAAGACAGTGCTATGGAGAAGCTTGGGGAGCTGAAGGATTCTGCTGCGGATGCTGCTAAGAGGGCTGCGGAATACTTGAGCGGCAAGAAAGAGGAAACCAAAGAGAAGGTATCGGAATCTGCCGAGGTCGCAAAGAACAAGGCTGCGGCGACGGCAGAGACGGCCAAGAACAAGGCTGCCGAGACTGCTGATGCAGCGATTAACAAGACTGCTGAGACGGCTGAGGCAGCTAAGAACAAGGGTAGGGAGATGAAGGACAAGGCTGCAGAAACTGCGGAGGCAGCAAAGAACAAGGCTGCAGAAACTGCGGAGGCAGCAAAGAACAAGGCTGCAGAAACTGCGGAGGCAGCAAAGAACAAGGCTGCAGAAACTGCGGAGGCAGCAAAGAACAAAACTGCTGAAACGACTGAGGCAGCAAAGAACAAGGGGAGGGAGATGAAGGACAAGGCTGCAGAAACTACTGAGGCAGCGAAGAACAAGACTGCTGAAACTAATGAGGCAGCGAAGAATAAGGCTGTGGAGATGAAAGACAAGGCTGCACAAAATGCAGAGGCAGCAAAGAACAAGACTTCAGAAGCAACTGATGCTGCGAGGTATAAGGCTATGGAGATGAAGGACAAGGCTGCGGACAGGGCTGCGGATACCACACAGGCAGTAAAACAGAAAACTGCACAGGCTTGGGACAGAACCAACAAGGAGAATGTGAGAGGCGTAGATGAAGATGCAAGGAGGAAAATGGAGGAGCTAAGGCTACAAGATAAAGGGTTCAAAGATTTATCTGAGGGGCGTGGAGATAATAAGAAGGTGGTGATGAAAGTGGAAGAGAGTCGACCAGGGGCAATGGCGGATACACTGAAAGCGGCGGATCAGATGGCGGGGCAGACCTTCAACGATGTGGGACGCTTCGATGAAGACGGGGTCGTGAGAAAGAAATGA	1545	0.5068	MASGQHQDRAEAASKIAANELEQANRERVRDVVGVVDDVSVVDKQHDQDQEKRGVIGSMLRAVQEAVAGKKESVPAKAHTTEVIHDVNFQPDDVTAGEVRDISVAKNPGIYDSSATDETGSKVGEYADYAAQKAKETKDAAMEKAGEYTDYASQKAKEAKDKTMEKGGEYKDYAAEKAKEGKDATLNKMGEYKDYTAEKTKEGKDSAMEKLGELKDSAADAAKRAAEYLSGKKEETKEKVSESAEVAKNKAAATAETAKNKAAETADAAINKTAETAEAAKNKGREMKDKAAETAEAAKNKAAETAEAAKNKAAETAEAAKNKAAETAEAAKNKTAETTEAAKNKGREMKDKAAETTEAAKNKTAETNEAAKNKAVEMKDKAAQNAEAAKNKTSEATDAARYKAMEMKDKAADRAADTTQAVKQKTAQAWDRTNKENVRGVDEDARRKMEELRLQDKGFKDLSEGRGDNKKVVMKVEESRPGAMADTLKAADQMAGQTFNDVGRFDEDGVVRKK	514

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	228	398	-	-
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	429	444	-	-
	Vian3g02157	514	PANTHER	LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN	244	495	-	-
	Vian3g02157	514	Pfam	Late embryogenesis abundant protein	173	214	IPR004238	-
	Vian3g02157	514	Pfam	Late embryogenesis abundant protein	115	148	IPR004238	-
	Vian3g02157	514	Pfam	Late embryogenesis abundant protein	193	225	IPR004238	-
	Vian3g02157	514	Pfam	Late embryogenesis abundant protein	149	192	IPR004238	-
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	278	297	-	-
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	1	24	-	-
	Vian3g02157	514	Gene3D	Apolipoprotein	262	403	-	-
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	410	444	-	-
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	365	386	-	-
	Vian3g02157	514	Coils	Coil	7	27	-	-
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	336	359	-	-
	Vian3g02157	514	Coils	Coil	354	399	-	-
	Vian3g02157	514	Gene3D	-	187	256	-	-
	Vian3g02157	514	Gene3D	-	113	165	-	-
	Vian3g02157	514	Coils	Coil	288	337	-	-
	Vian3g02157	514	MobiDBLite	consensus disorder prediction	228	245	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian3g02157	Vian-Chr3	31149042	31150790	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian3g02157	-		-	vun:114189667	620.157

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian2g02431	2	44800019	44801024	Vian3g02157	3	31149042	31150790	PCT