Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02431 ATGGCGTCGGGACAGCAATTCAAGGGAGACAGAGCGGAGGCAGCGGCCAAACTTGCCGCCAAAGACATCGGCGATATCAACAGAGCGAACGAGCGCAACGACAACTTCGACCTTCATTCCGAGGCCAACTTTAAGCAAGCACGAGCAGAAGCAGCTGCGAAGCTCGCCGCAAAGGATCTGGAGGATGTTAACAAAATGAGGGACAACAATGCCACCACATTCAAAGAGCAGCAGCACTACACCGAGAATAAACCCGGTGTGATAGGGTCCATGTTCAGAGCCGCTAAGGAAGCGGTGGTTGGGAAGCCTCACGATGCGGTTGAGACCTGTCCAGGGGTTTACGATTCCAGCAGAGAGAGGATAACGAAGGAGCAAGGTGGGTCGAAGATGGGGGAATATGCAGATTATGCGACTCAGAAGGCGAGAGAAACGAAGGATGCAACGGTGCAGAAGGCTGGGGAGTACACGGACTTTGCGACTCAGAAAGCAAAAGAAAGCAAGGACTACGCCGCGGATAAGGCAAAGGAAGCTAAAGATGCTACAGTGCAGAAAGCTTCAGAGTACAAGGATTATACTGCTGAGAAGGCTAAGGAAGGGAAGGACAGTGCAACGGGGAAGCTTGGAGAGTTGAAGGACTCTGCTGCTGATGCTGCTAAAAGAGCTATGGGCTACTTCACCGGCACCAGAGACGAAACAAAGGTGAGTGGAACTGCGGAGGATACCAGGCGAAGAACCCAAGAGGTGAGGGTGCAGGATAAGGACTATGGAACGGGGCATGGAGGAGAGAAGGTGGTGATAAAAATGGAAGAGTCTCGGCCGGGAGCGGTGGCGGATGCGATGAAAGCGGCGGAGAGGGCCTTGGGCGGCGAGATGGAGGAAGAAGGTATCCTTCGTGTGGAGCGTCGTAGGGAGAAAATGTGA 921 0.5364 MASGQQFKGDRAEAAAKLAAKDIGDINRANERNDNFDLHSEANFKQARAEAAAKLAAKDLEDVNKMRDNNATTFKEQQHYTENKPGVIGSMFRAAKEAVVGKPHDAVETCPGVYDSSRERITKEQGGSKMGEYADYATQKARETKDATVQKAGEYTDFATQKAKESKDYAADKAKEAKDATVQKASEYKDYTAEKAKEGKDSATGKLGELKDSAADAAKRAMGYFTGTRDETKVSGTAEDTRRRTQEVRVQDKDYGTGHGGEKVVIKMEESRPGAVADAMKAAERALGGEMEEEGILRVERRREKM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02431 306 MobiDBLite consensus disorder prediction 228 262 - -
Vian2g02431 306 Gene3D - 121 168 - -
Vian2g02431 306 Gene3D - 169 226 - -
Vian2g02431 306 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 12 292 - -
Vian2g02431 306 MobiDBLite consensus disorder prediction 233 262 - -
Vian2g02431 306 MobiDBLite consensus disorder prediction 161 206 - -
Vian2g02431 306 Pfam Late embryogenesis abundant protein 128 153 IPR004238 -
Vian2g02431 306 Pfam Late embryogenesis abundant protein 134 176 IPR004238 -
Vian2g02431 306 Pfam Late embryogenesis abundant protein 167 210 IPR004238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02431 Vian-Chr2 44800019 44801024 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02431 - - pvu:PHAVU_001G184600g 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02431 2 44800019 44801024 Vian3g02157 3 31149042 31150790 PCT