Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02141 ATGGTGGGTGAAGCAGTGAATGGGAGATGGCTTAGTGGTCTGTTGCCAGTTTCACGCAAGAGCGTATCAGATAGTAAGGAAGTGATTGGGATTTTGGCGTTTGAAGTTGCTGGTTTGATGTCTAAGGTGGTTAGTTTATGGCATTCTTTGAGTAGCAGGGAGATAATGATTACGAAGGAATGGATAGTGAAATCGGTTGGGGTCAAAATGCTAGTGTCTGATGATGAAGACTTCTTGATGGAACTGGCATTGAGTGAGATACTCAATAATTTTGAGTCTCTAGCTTGGTCTGTAGCCAGGTTGAGTAAGAGGTGCAAGGATCCAGTGTATCATGGTTATGAACATTTTCTTCTCAACCCTGTTCAAAATTATGTTCAATGGTCTGGGTGGGAATATGCATGGAAAAAGATGGAGAGGAAGGTGAAGAAAATGGATAGATTTGTTGGTGCTATGTCACTGCTGTCACAAGAGCTTGAGGTACTAGCTGAGAGAGAACAGACTTTCAGAAGAATGAAAACGAATCGCCAGCTTCATGGGGTGAAACTGCTTGAGTTTCACAAGAGGGTCATGTGGCAGCGACAGCAAGTGAAAACTCTGAGAGACATGTCACCGTGGAACAGAAGTCATGACTATGTGGTCCGGTTATTGGCAAGATCTTTGTTCACAATTCTTGAGAGAATCATCCTTGTCTTTGGAAATAGTCCTATACCTATTGAAAACCAGGAAAATGAATCCCTTTCTCCCTCTGTGAATCATCTTACTCGCAGACATTCCTTCTCTTCTCTTAAGCATTCTTCTAAGATTGATTCACGTGGATTCAGTTCACAACGTTTTGAGAGCAAGCAAGGGTTTGTAGAGGAGAAAACCAAGAGCAAGAGAAAGAAGAAAAAGCAACAAGTGCTTCATTCAGAAAGCAAGCAGTTCAAAAATTTTGGGCCATTCATAGGTTGCACGTCAGTTGGAAATAATTCTCCTGTGGCACAAACTTGTATGCCAAGTAATGTGAAGAACATTCAGAAGATAGTGGATAAAAAATCTCTGACATGCAGAAGAAGAATTTATTTTAAGCTATATATGAAGGATCGGTTAAAGGCAGGAGAATCTACCCTTGGCTATGCAGCTTTAGCTCTACATTATGCAAATGTGATTGTACTAATAGAGAAGATGGTATCAGCAGCTCACCTCATAGATCATGAAACAAGAGATGATTTGTATGACATGTTACCAAGCACTATAAGAAGCGGTCTGAGGGGTAAGCTTAAGTGGTATGGAAAGAGCACGCGTGCCTCTGTCGATGAAACTAGTCTTGCAATGGAATGGAGTTTGGTGCTTTCACACATATTGGAATGGTTGGCCCCTCTGGCACACAACATGATAAAGTGGCATTCTGAGAGAAATTTTGAGAGGGAGCAATCTGCTTGCAAAGCAAACATTTTGCTTGTTCAAACTCTTTACTTTGCAGACCAAGCAAAAGCTGAAGCTGCAATGGTTGAACTCCTTGTTGGTCTTCACTATGTGTGCAGGATTAATAGAAAGGCTCGCATGAGAAAGAATGAGTACAATAAATGA 1569 0.413 MVGEAVNGRWLSGLLPVSRKSVSDSKEVIGILAFEVAGLMSKVVSLWHSLSSREIMITKEWIVKSVGVKMLVSDDEDFLMELALSEILNNFESLAWSVARLSKRCKDPVYHGYEHFLLNPVQNYVQWSGWEYAWKKMERKVKKMDRFVGAMSLLSQELEVLAEREQTFRRMKTNRQLHGVKLLEFHKRVMWQRQQVKTLRDMSPWNRSHDYVVRLLARSLFTILERIILVFGNSPIPIENQENESLSPSVNHLTRRHSFSSLKHSSKIDSRGFSSQRFESKQGFVEEKTKSKRKKKKQQVLHSESKQFKNFGPFIGCTSVGNNSPVAQTCMPSNVKNIQKIVDKKSLTCRRRIYFKLYMKDRLKAGESTLGYAALALHYANVIVLIEKMVSAAHLIDHETRDDLYDMLPSTIRSGLRGKLKWYGKSTRASVDETSLAMEWSLVLSHILEWLAPLAHNMIKWHSERNFEREQSACKANILLVQTLYFADQAKAEAAMVELLVGLHYVCRINRKARMRKNEYNK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02141 522 Pfam Protein of unknown function (DUF668) 369 460 IPR007700 GO:0045927
Vian3g02141 522 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Vian3g02141 522 PANTHER BNAC09G50660D PROTEIN 23 516 - -
Vian3g02141 522 MobiDBLite consensus disorder prediction 284 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02141 Vian-Chr3 30793831 30795399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02141 - - vra:106770948 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02141 3 30793831 30795399 Vian3g02141 3 30793831 30795399 ECH
Vian2g02440 2 44899560 44901260 Vian3g02141 3 30793831 30795399 PCT