Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02440 ATGGGGGGTGAAACGGTGAACGGGTCATGGTTCAGTTCTTTGTGGCCAGTCTCTCGGAAGAGTACATCATCCGATAACAAGGTTGTGGTGGGAATTTTGGCATTAGAAGTCTCAGGGTTGATGTTGAAGGTGGTTAATTTATGGCAGTCTTTGAGTGATAGGGAGGTATTGAGTCTGAGGGAAGGGATAATGAATTCAATTGGAGTAAAAATGCTGGTGTCTGACAATGATGATTACTTGATGGAACTTGCGATGAATGAGATGCTTCATAACTTTCAATCTCTTGCACGCTCGGTGGCTAGGTTGGGTAAGAAATGCGTTGATCCGGTTTATCATCGTTTTGAACATTTTGTTCATAACCCAGCTCAACATTATTTTCAATGGTCTGGATGGGAGTATAGGTGGAAAAAGATGGAGAGGAAAGTGAAGAAAATGGAAAAAATTATAGCTGCTACGACACATTTTTGCGAAGAGGTTGAGGTGCTAGCAGAGGTTGAACAGACTTTCAGAAGAATGCAGGCAAATCCGGAATTGCATCGGGTGAAATTGCTTGAGTTTCAGAAGAAGGTTATGTTGCAGCGGCAGGAAGTGAGAAATCTCAGAGACATGTCTCCATGGAATAGAAGTTATGATTATGTTGTCCGGTTGTTGGCGAGATCACTATTTACGATCCTGGAGAGGATTGTACTTGTTTTTGAAAACAAACACCCACCGACTGTCCAACCACATAATGATTCTCTGCATATGAATTCTAACAATCTTCTGCGAAGTCATTCCTTTTCTGTTATGCATTCATCTGTTTATCCTTCAGAGAACAATATCTACGGATTGAATTCAGGTCCTGCTGGGGGGAGGCCGGTATTAAACTCGGGCTTTTTAGTAGGCAAAGGGAAAAGAACGAAGAAACAGCAGCAGAAAGAAGAACCTGTTTTCTTCAGAAAGAACACACATTCAGAAAGCAAGCACTTGGGACATATTATGGGCTTCAAAGGTTGTATGTCTGCTGCAAACGGTTCTCCTGTCATACAGAGCTGTATGCAGACAACTGGTGGCTCCATGAGGTTGACTGATTGTCATTTGAAATCTGTTGATAAAATGAAAACAGTGAATGAGTTATCTCTCCTCAACAGAGTTAGAATATATTCTAAGTTATCCATCCATAAACTGTTAAAGCCTGCTTCCAAATCCCTTGGTGATGCAGCTCTTGCCCTGCATTATGCCAACATGATTGTATTGATTGAGAGGATGGTGACATCACCGCACCTGGTTGATCTTGCCACAAGAGATGATCTATACAGTATGCTTCCAACTACTGTAAGAACTGCTCTAAGGGCTAAGCTTAAAAGTAAATCTTCTTCCAATCATCATGATGCAAACCTTGCTGCAGAATGGAGTCTGCTACTTGCACAGATGTTGGAATGGTTGGCCCCACTGGCACATAACATGATAAACTGGCATTCTGTGAGAAATTTTGAGAAGGAGAACTCAAATTTTAGCGCAAATGTTTTACTTGTTCAAACTCTTTACTTTGCAAACCAAGCAAGAACCGAGGCTGCAATAGTTGATCTTCTTGTTGGTCTTAACTATGTGTGCAGAATTGATACAAAAGTTGGCACAAGAGATACACTGGATTGTGCGAGGACTAGAACTTTTAATGGTGTTCGTTTAAGAAAGAATGGAATGTACAATGAAATTTTATAG 1701 0.4103 MGGETVNGSWFSSLWPVSRKSTSSDNKVVVGILALEVSGLMLKVVNLWQSLSDREVLSLREGIMNSIGVKMLVSDNDDYLMELAMNEMLHNFQSLARSVARLGKKCVDPVYHRFEHFVHNPAQHYFQWSGWEYRWKKMERKVKKMEKIIAATTHFCEEVEVLAEVEQTFRRMQANPELHRVKLLEFQKKVMLQRQEVRNLRDMSPWNRSYDYVVRLLARSLFTILERIVLVFENKHPPTVQPHNDSLHMNSNNLLRSHSFSVMHSSVYPSENNIYGLNSGPAGGRPVLNSGFLVGKGKRTKKQQQKEEPVFFRKNTHSESKHLGHIMGFKGCMSAANGSPVIQSCMQTTGGSMRLTDCHLKSVDKMKTVNELSLLNRVRIYSKLSIHKLLKPASKSLGDAALALHYANMIVLIERMVTSPHLVDLATRDDLYSMLPTTVRTALRAKLKSKSSSNHHDANLAAEWSLLLAQMLEWLAPLAHNMINWHSVRNFEKENSNFSANVLLVQTLYFANQARTEAAIVDLLVGLNYVCRIDTKVGTRDTLDCARTRTFNGVRLRKNGMYNEIL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02440 566 Pfam Domain of unknown function (DUF3475) 32 88 IPR021864 GO:0045927
Vian2g02440 566 PANTHER BNAC09G50660D PROTEIN 24 544 - -
Vian2g02440 566 Pfam Protein of unknown function (DUF668) 397 483 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02440 Vian-Chr2 44899560 44901260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02440 - - gmx:100809482 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02440 2 44899560 44901260 Vian2g02440 2 44899560 44901260 ECH
Vian2g02440 2 44899560 44901260 Vian3g02141 3 30793831 30795399 PCT