Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02132 ATGGAGGTTGGGGAGATGGATGGAAAAGAGCCACAAGTTGAGGTTCCTTTGGTACCTGCCACCCTTATTAAGCCTGTTCCTCTAAAACCAGTGCCGATCTACACGCCCGGGGTGATTAACCAAATGGGTTATCATGCAAATGGAGCAGTTGCATGTGTTGAATTTTCAATTGGCCAGGAGAAATTGTGTAGGTCAGATATTAGGTCAGCTATTGGGTCAGACGTCGCTCGTGACAGTGGCAAAACTGGCGAACATACAGCTTCTGATGCTTCTTCCAGCTTCAGCAAACTCGGGTTTTGTGAACATTTGTTCGCGGTTGAGGCTGAATCGAGGAACTCCAGTATGACAAAAGGGACTAATGAAGGATTCAACAATCCATTTGTCCCTTCTTTCATCCTTGACAATATTCAGGACCCTCAGGAAACATACATTGCTTGCTGTAGCAACAGAATTTCACAGGATACCCCATTTACACTTGACAATGCGGACAAAGAAAGCAGACAAATAGCATCAATGCAAATCAATATGGAAGAAAATGATCCAGGTGGGGAAGAGAGAAATGGCCCTGCCAGTAAGCTTGACAGTAATGTACTGCCAAGCAGCAAAGAACTCTGTGACCCTATCATGGAATTCGCTGCTATTTCTTCACCATTCAAGGAGAATCAAAACCAGGATAAGGGAAGCAATCTTGATACTAATCTTAATAAAACACCACAACCAAAACCAAGGAGAAGAAAACACCGTCCCAAGGTCATCAAAGAAGGCAAACCCAAAAGAACTCAGAAGCCTGTTACCCCAAAGCCTGTTCAATCAAAAGGAAACCCAACTGTGAAGAGGAAATATGTGAGAAAGAATGCATTGACCAAGACTTCTATTCCTCCAACGGAAGTGACTAGCGAATTGACAAAAGAAATGCCTGAAACTGCCAAAACGTCTTGTAGAAGGGTCATAAATTTTGACATGGGAGCAAGAGATGAAAGTTCTGCTGGCATAGAAAACGTAACTGCACTGTTGGGAAAAGAAAATGGCGTGAATGTAGGCCTTGCAGATGATCTGAACTCTTATGTGAAGCAGGCGTCAAACAGTTACACATCAATACCAGAAGACACGCAAGCCCAAAATACATTTCCTTCGGGAAGAAAAGGCTCAGGGACAAAACCAGCTGCAAAGAGGAAGTATGTGAGAAGGAAAGGAGTGAGCATGACTTCTGCTCCTGCAGCAGAAATTACTTTAGGGATGCCCCAGTCCACCCAAATGCCATGTACAGAGTTTAGAAATTTTGATGAAATAACCAGAGATCAAAGGTGTGAAGTCAAAGAGCATGCAACAGTATGTACTGGTAGTGAAATTGGTGTAATCATGCAGGAAATGAATGCAGGCCTAGCAAACTATTTAAACACTTCCGTTACCCAGCCAACAAAAGATTGCATGTCTTTAGCAGAAGACTCACGAGCCCTAAATACATCTTCAGGAAGAAAATGCTCTGTGACAGAACCAGAGGAAAACTCAGCTGTTAAGAAGAATACAAGGAAAAAGGTGAATTCGACTTCTCTAACAGAAGTGGCTGGAGAAATGATTACAGAAAATGTGCCTGGATCAGCCCAAGAGAATCCAATTATCATTCCAGGCATAGAAATTGGTGTAGCCATGCAGGATACTAATGTAGGTCTTGCCTATGATCTTAACACTGACATGAAGCTGGCATCAAACACTTACGTGTCATTACCAGAAGAAACACAAGCCACAAATACATCTTCAAGAAAAAAGAGATCTGGGACAAAGCGAAACGAAAACCCAACTGCCAAAAGGAAGTATGTGAGAAAGAAACGGGTGAAGACATCTGCTCCTCCAATTGAAGTACCAGGAGAATTGACTAGAGAAAACATGTCAGTATCTCCTATTCCTTCAGAAATAACAGGATTGACTGAAACAGTGATAGTTCATTCTAACAATATGTCATGGAGGCCTTCAAAATCTGACATGGGAACTAGAGATGTAAGGTATGTACGGAGAGAAAATTTACATTTGCACATGGGAAAGGAAAATGTGGTGTTAGAGGAAACAAAAGTAGGTCTCAAGTGTAATCAAGACCCTTGGATGAACGCAACATTAACTAATTGCAATCCATTACCTGACAGAATGCAACAACTTGGTACATCTCCTGGAGCTACACATCTTAGTACATCTCTTTCAAAATACACCCACCTTGGGACAACGGCTTGGGATGGAAACATCAGTAATAGTCAAAGTTCAACCATGAGGTTACAAATGGATGGTACAAAGAGGAAATATTCTAGTAGCTTTAGTCATGCTGATGACAGCAGCATGAATCTGATTGGAGCACATTTTAATGGATTGTTATCATACAAGAATAGCTGCTACCTTCAGTTTCCAAACATACAGAAGAAAAGGAGAACTGGAAAAGGGAAAACTTCTGGCACGTACAACAAATCTGTGACTGCAACAAAAGTCCAACAGGCATATCCTCAGAAAGATGCTCTAGGACATCCTTATGCATCACGCCCTAGCTGCTGGAATTATGGATCTGGTTATAATACGACAGCGGTCCCAGTCATTAGTGAATTTCCTGAAAATTTTATTGATAATACTAAAGCATTTATGTTGTCTTTGAAAAGGCGGGAAGAAAGGTCTCAAACCTCTAATTGTGGTTCTGGTTCTCCAACCAGAATTAGAAACGGTGATACTGAACCAAATTATAATACAAAACAAGTAGGGATACCTGCCAGAGAAACATTTAGGGATGCAAAAAGACCTCAAACATGCATTGATGCTTTAATCGCAGATACACCTACATCACTGCCAAAAAAGAAACGGAATAGAAAGAAAAAAGTCATTTCCAGTTCAGCACATTCTAACACAAACGAGATGCTACATAATTTTACATTGGGGAAGCCATCAGATGTTGCTTCCGAAGTACTGTGGAAAACAATGAGCTATGTTGATGCATTAACATTGCAGTTTAGACGACTAAACATAAACACAGAAGCCAGAGACCTCGCATTTCATGAGCAGAATGCACTTGTTCTGTATAAACAGCCAAATCGAAAGCAAAACAGCCTTATCCGTGGAGATGGGGCCATTGTTCCCCTTCAAATCAAGAAACAGCATCTACGACCAAAGGTTGACCTTGATGATGAGACCGATAGAGTGTGGAAGCTTTTGTTGCTTGATATAAACAGTCCTGGAATTGATGGAACAGATGAAGATAGGGCCAAATGGTGGGAAGAAGAGCGGAATGTGTTCCGAGGACGAGCAGACTCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGATTGGAGTTTTCCTCACCCAGAATGTCTCTGACCATCTTTCCAGCTCTGCTTTCATGTCCCTTGCTGCTCGATTTCCAAAAAATTTAGGTAGCATGTACAAAGCACACCAGGCAGAAGACACAAGGCTGGAACCACAAGTGCGTGTAGTGGAACCAGAAGAAGGAACTGAATGGAATGTAAAATTATTGAATCAATCTGTTTATGACCAGAGTTCTTTGACGACAGATATAGTTGAGCGTTCTGCAGAAAAAGAAGCCATCAACAGCAATGATTCATGTGGAACTACCAGCAGTGCAATTAGTCTGTCAGATGAATCAAACTCCAGATTGTCAGTATCATCTCAACAAAATATTAAGGAACAGTGTAGTCCAATGGGAAGTGGACTATATTGTTCCACAATTGAGGAAGGAGAAGAAAAATCATGTGATGATGATAGGAAAGAGTTGATTGATATAGTTTCATCCCAAGGCTCTGTCATTTCATCTCAAATTTCTGGAGATTTTTCAAATGATCAAAATCCTGAGAAAATAGGAGCATGTTCAGATAGCAACTCGGAAGTAGAAGTTCTATCGAAAACAGCAAAGTGCAACCATTATGATAGTAACACTTCTTTCAGTAAACTCCTCGAAATGGTTAGTTCAACCAAGTTTTATGAAGATAACAATCAGAAAAGCAAATCAAATCAGAACTTAAGAGATGCATATGATCAATCTTTATGCAGGCAGCATGACACCCCAAAAGAAAGCTTGCAAAAGTCAAGTGTTACTCATGGCTCTTCAGAAGCATCCATTAACCTGTCCCATGACTGCTTTGATCCTTTCAAAACCAAATCATCAGGTGACTTCTTGATGAAAAAGGATGATAATGGCATGAACAGATCTAGTTCTCAAACAACAGAACCTGCCAGCCAAGTTGCAATTACTCTTTCTCAAACTATTGTGTCTCAAGTCCATCCTCAGGAACAAAGCAATCACCAGCAACAAAGCTTTTTCAATTTCAACAGCCCTGAACAAACTCAAGATCTTATGCAGAAAGAAAGGGGATCAGATCTTGGCAAGCACAAAAATGCCACGAGGAATGGAGTCAATGAGATAAGTTCTGCCCCATTAAAAGTAAAGACCAAGGATCAAGGAAAAGTTCAAAAGGATGATTTTAACTGGGATAGTTTAAGAATAGAAGCACAAGCTAAGGCTGGGAAAAGAGAAAAGACAGAAAACACCATGGATTCTTTAGATTGGGAAGCTGTGAGATGTGTAGATGTCAATGAAATTGCCAAGACCATCAAAGAACGGGGTATGAACAACAGGCTTGCAGAACGGATTCAGAATTTCCTGAATCGCCTGGTTGAAGAACATGGAAGCATTGACCTTGAATGGCTGAGAGATGTTCCACCAGACAAAGCAAAAGAATACTTGCTCAGTGTAAAAGGATTGGGATTGAAAAGTGTGGAATGTGTGCGGCTTTTAACACTGCACCACCTTGCCTTCCCGGTAGACACAAATGTTGGACGAATAGCAGTACGACTGGGGTGGGTACCTCTGCAGCCACTGCCTGAAACACTGCAGTTGCATCTCCTAGAATTATATGAGCTACATTATCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGGAGAATGTAGACATTTTGCTAGTGCATTTGCAAGTGCAAGGCTTGCACTGCCTGGACCAGAGCAGAAGACTATAGTTAGCACAGTTGGAAATAGTGTGATTGACCAGAAGCCATCTGAAACCATCAGTCAGTTGCACTTGCCTCCCCCTGAGAACACAACCCAAGGAGAAGAAATTCAACTAACAGAAGTGTGCAGGCCATTGGAATCAAAATCAGAGATAAATATTTGTCACCCTATCATTGAAGAGCCAACAACTCCAGAACCAGAATGCTCCCAAGTATCACAAATTGATATAGAGGATACTTTCTATGAGGATTCATGTGAAATTCCTACCATCAAGCTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTACATGCAAGAAAAGATGGAACTCCAAGAAGGTGAAATGTCAAAGGCATTGGTTGCTTTGAATCCAGAAGCTGCTTCAATTCCTATGCCCAAGCTAAAGAATGTGAGCCGATTACGAACAGAGCACTGTGTTTATGAACTCCCAGATACACATCCTCTTCTGCAAGGGTGGGACACACGAGAGCCTGATGATCCAGGCAAATACCTTCTTGCTATATGGACTCCAGGTGAAACAGCAAATTCTATACAGCCACCAGAAAGCAAATGCAGCTCCCGAGAAGAATATGGCCAACTCTGTAATGAGAAGGAATGTTTTTCATGCAACAGTTTCCGAGAAGCTAATTCACAGATAGTTAGAGGGACACTCTTGATACCATGTCGAACAGCTATGCGGGGAAGTTTTCCACTGAATGGCACCTATTTCCAGGTCAATGAGGTATTTTCTGACCACGAGTCTAGTCTTAACCCAATCAGTGTGCCCCGAAGTTGGATCTGGAACCTAAATAGACGAACAGTATATTTTGGAACCTCCGTACCAACAATATTTAAAGGTTATGTCTGCGTGCGGGGATTTGACAGGGAAACACGAGCACCCCGTCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGGCTAAGACTAAAGAGAAGACCGAAAAGGGATCGACTTCCGCAAAATCACGAGGAATGAAATCAAATGTAGAACAGCCGGAATTGATTTCTAACAGTAGCAACTTTTAA 6147 0.4145 MEVGEMDGKEPQVEVPLVPATLIKPVPLKPVPIYTPGVINQMGYHANGAVACVEFSIGQEKLCRSDIRSAIGSDVARDSGKTGEHTASDASSSFSKLGFCEHLFAVEAESRNSSMTKGTNEGFNNPFVPSFILDNIQDPQETYIACCSNRISQDTPFTLDNADKESRQIASMQINMEENDPGGEERNGPASKLDSNVLPSSKELCDPIMEFAAISSPFKENQNQDKGSNLDTNLNKTPQPKPRRRKHRPKVIKEGKPKRTQKPVTPKPVQSKGNPTVKRKYVRKNALTKTSIPPTEVTSELTKEMPETAKTSCRRVINFDMGARDESSAGIENVTALLGKENGVNVGLADDLNSYVKQASNSYTSIPEDTQAQNTFPSGRKGSGTKPAAKRKYVRRKGVSMTSAPAAEITLGMPQSTQMPCTEFRNFDEITRDQRCEVKEHATVCTGSEIGVIMQEMNAGLANYLNTSVTQPTKDCMSLAEDSRALNTSSGRKCSVTEPEENSAVKKNTRKKVNSTSLTEVAGEMITENVPGSAQENPIIIPGIEIGVAMQDTNVGLAYDLNTDMKLASNTYVSLPEETQATNTSSRKKRSGTKRNENPTAKRKYVRKKRVKTSAPPIEVPGELTRENMSVSPIPSEITGLTETVIVHSNNMSWRPSKSDMGTRDVRYVRRENLHLHMGKENVVLEETKVGLKCNQDPWMNATLTNCNPLPDRMQQLGTSPGATHLSTSLSKYTHLGTTAWDGNISNSQSSTMRLQMDGTKRKYSSSFSHADDSSMNLIGAHFNGLLSYKNSCYLQFPNIQKKRRTGKGKTSGTYNKSVTATKVQQAYPQKDALGHPYASRPSCWNYGSGYNTTAVPVISEFPENFIDNTKAFMLSLKRREERSQTSNCGSGSPTRIRNGDTEPNYNTKQVGIPARETFRDAKRPQTCIDALIADTPTSLPKKKRNRKKKVISSSAHSNTNEMLHNFTLGKPSDVASEVLWKTMSYVDALTLQFRRLNINTEARDLAFHEQNALVLYKQPNRKQNSLIRGDGAIVPLQIKKQHLRPKVDLDDETDRVWKLLLLDINSPGIDGTDEDRAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPKNLGSMYKAHQAEDTRLEPQVRVVEPEEGTEWNVKLLNQSVYDQSSLTTDIVERSAEKEAINSNDSCGTTSSAISLSDESNSRLSVSSQQNIKEQCSPMGSGLYCSTIEEGEEKSCDDDRKELIDIVSSQGSVISSQISGDFSNDQNPEKIGACSDSNSEVEVLSKTAKCNHYDSNTSFSKLLEMVSSTKFYEDNNQKSKSNQNLRDAYDQSLCRQHDTPKESLQKSSVTHGSSEASINLSHDCFDPFKTKSSGDFLMKKDDNGMNRSSSQTTEPASQVAITLSQTIVSQVHPQEQSNHQQQSFFNFNSPEQTQDLMQKERGSDLGKHKNATRNGVNEISSAPLKVKTKDQGKVQKDDFNWDSLRIEAQAKAGKREKTENTMDSLDWEAVRCVDVNEIAKTIKERGMNNRLAERIQNFLNRLVEEHGSIDLEWLRDVPPDKAKEYLLSVKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPETLQLHLLELYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKTIVSTVGNSVIDQKPSETISQLHLPPPENTTQGEEIQLTEVCRPLESKSEINICHPIIEEPTTPEPECSQVSQIDIEDTFYEDSCEIPTIKLNIEEFTLNLQNYMQEKMELQEGEMSKALVALNPEAASIPMPKLKNVSRLRTEHCVYELPDTHPLLQGWDTREPDDPGKYLLAIWTPGETANSIQPPESKCSSREEYGQLCNEKECFSCNSFREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFSDHESSLNPISVPRSWIWNLNRRTVYFGTSVPTIFKGYVCVRGFDRETRAPRPLMARLHFPASKLAKTKEKTEKGSTSAKSRGMKSNVEQPELISNSSNF 2048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02132 2048 MobiDBLite consensus disorder prediction 938 957 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 886 912 - -
Vian3g02132 2048 Gene3D - 1606 1699 IPR023170 -
Vian3g02132 2048 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 145 372 IPR044811 GO:0019104|GO:0035514|GO:0080111
Vian3g02132 2048 MobiDBLite consensus disorder prediction 2013 2048 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 1408 1423 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 1206 1236 - -
Vian3g02132 2048 CDD ENDO3c 1531 1640 IPR003265 GO:0006284
Vian3g02132 2048 Coils Coil 1792 1812 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 177 199 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 1362 1381 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 489 508 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 368 388 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 1401 1423 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 239 255 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 2027 2048 - -
Vian3g02132 2048 Gene3D Hypothetical protein; domain 2 1509 1605 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 880 920 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 1461 1498 - -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 217 276 - -
Vian3g02132 2048 SMART endo3end 1511 1660 IPR003265 GO:0006284
Vian3g02132 2048 MobiDBLite consensus disorder prediction 574 620 - -
Vian3g02132 2048 Pfam Permuted single zf-CXXC unit 1886 1918 IPR028924 -
Vian3g02132 2048 MobiDBLite consensus disorder prediction 1204 1236 - -
Vian3g02132 2048 Pfam RRM in Demeter 1921 2008 IPR028925 -
Vian3g02132 2048 SUPERFAMILY DNA-glycosylase 1090 1683 IPR011257 GO:0003824|GO:0006281
Vian3g02132 2048 SMART ccc3 1661 1681 IPR003651 GO:0051539
Vian3g02132 2048 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02132 Vian-Chr3 30337901 30348740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02132 - - gmx:100806794 2442.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02132 3 30337901 30348740 Vian3g02132 3 30337901 30348740 ECH
Vian2g02450 2 45029580 45033798 Vian3g02132 3 30337901 30348740 PCT