Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02056 ATGGGCATACTCTACGACGACGTGGTGATCATAAGCGAGCCACAAAAAGACGGCGACCCAACTGTTCTCACTGTCAATTGCCCTGACAAAACTGGTCTGGGCTGTGATTTGTGCCGCATCATACTCTTCTTTGGTCTCAACATACTCAGAGGAGATGTTTCAACGGATGGGAAATGGTGCTACATAGTTTTCTGGGTCGTTGGGAAAAACAGGACGAGGTGGAGTTTGCTAAAGAAGAGGCTGATTGAGGCATGCCCTTCTTGCTCCTCGGCTTCTGGAATCTCTTATTATCGATCTGAGTTGCAGCCCTCCAAGCCTCCTGATGTCTTTCTTTTGAATTTTTGCTGTCATGACCGGAAAGGGCTTTTGCATGATGTTACTGAGGTTCTTTGTGAGCTAGAACTTACTATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTGATGGATCTGTTTTTCATCACAGACACCAGAGAACTTCTACACACAAAGAAGAGAAAGGACGAAACAATTGAACATCTAACAGAGATTTTGGGGGATGCCATAATTTCTATTGACATAGACTTGGTTGGCCCAGAAATTACAGCTTGTACCCAGGCATCTCCATTGCTTCCAACTGCAATCACAGAAGATGCCTTTGATTTGGAATTGCCCGATTTGGCTCGGGGAGGAACTTTGAGGTCAGATTATGTTTCTGTCATGATGGACAATACGCTTAGTCCTGCTCACACCCTTGTCCAAATTATGTGCCAAGATCACAAAGGTCTACTTTATGACATCATGAGAACTCTGAAAGACTACAACATTCAGATTTCTTATGGGCGTTTCACTACAAAACCTAGAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATTGTTGACCCAAACAAGCAGAATTCATTGTCATCACGCCTTAGAATGGAACTATTTCGACCACTCAGGGTAGCCATTGTGAGTAGGGGCCCGGATACCGAGCTTCTGGTCGCAAATCCAGTGGAGTTATCTGGCAAGGGCCGACCTCTTGTTTTTTATGATATCACTCTAGCACTCAAAATGCTAGGCACTTGCATATTTTCGGCTAAAGTTGGGAGACACGTAATTGGAGATCGTGAGTGGGAGGTTTATAGAGTCTTGCTTGATGAAGGGGAGGGGTTATCTTTACCAAAGAACAAGATTGAGGAGGGAGTTTGGAAAATGCTGATGGGTTGGGAGTAA 1239 0.4415 MGILYDDVVIISEPQKDGDPTVLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVVGKNRTRWSLLKKRLIEACPSCSSASGISYYRSELQPSKPPDVFLLNFCCHDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTKKRKDETIEHLTEILGDAIISIDIDLVGPEITACTQASPLLPTAITEDAFDLELPDLARGGTLRSDYVSVMMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKIVDPNKQNSLSSRLRMELFRPLRVAIVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGTCIFSAKVGRHVIGDREWEVYRVLLDEGEGLSLPKNKIEEGVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02056 412 SUPERFAMILY ACT-like 107 179 IPR045865 -
Vian3g02056 412 SUPERFAMILY ACT-like 244 295 IPR045865 -
Vian3g02056 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Vian3g02056 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Vian3g02056 412 SUPERFAMILY ACT-like 19 81 IPR045865 -
Vian3g02056 412 Pfam ACT domain 111 167 IPR002912 -
Vian3g02056 412 Gene3D - 108 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02056 Vian-Chr3 26323574 26326142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02056 - - gmx:100816138 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02056 3 26323574 26326142 Vian3g02056 3 26323574 26326142 ECH
Vian2g02389 2 44356527 44358873 Vian3g02056 3 26323574 26326142 PCT