Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02389 ATGGGGATACTGCACGACGACGTAGTGCTTATCAGGGAGGCCGAGAAAGAAGGTGAAAGCACCGTAATAACAGTCAACTGCCCCGACAAGACCGGTCTAGGTTGTGATTTGTGTCGTATAATTCTCTTCTTCGGTCTTAGCATTGTACGGGGAGATGTGTCCACTGATGGCAAATGGTGCTACATAGTTTTCTGGGTGGCGGGGAAGCAAAGGACTAATTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGTCCTTCTTGTTCCTCAGCTTCTGGGATTTCGTATTACCGTTCAGAATTGCAGCCTCCTAAGCCCTCTGATGTGTTCCTCTTGAAATTTTGTTGCCATGATCGAAAAGGCCTTTTACATGATATTACAGAGGTTCTTAGTGAGCTAGAGCTCATCATACACAAAGTGAAGGTTTCTACTACACCTGATGGCAGAGTGGTGGATCTGTTTTTTATCACGGATACCAGGGAACTTCTACACACAAAGAAGAGAAGCGACGACACAATTGAACAGTTGTCAGTTGTTTTGGGGGATCCCTCAATTACCATTGACATTGAATTGGTTGGCCCAGAAATTACTGCTTGTTCTCAAGCATCTTCTTTCCTTCCAAGTGCAATCACAGAAGATATCTTTGATTTGGAATTACCTGCTTCATTACAAAGCGGGACTTCCACATCTGATTCTGTTTCTATTGTAATGGACAATTCGTTGAGTCCTGCTCATACGCTCGTCCAAATTATATGCCCAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAATATTCAGATTTCTTATGGGAGATTCTCAACAAAACCCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGATGGGAAAAAAATAGTTGACCCCAACAAGCAGAAGTCTTTGTCATCACGCCTTAGGACTGAACTACTTCGTCCCTTCAGAGTAACCGTTGTAAGCAGGGGCCCTGATACGGAGCTGCTGGTTGCAAACCCTGTGGAGTTATCTGGCAAAGGAAGACCCCTTGTTTTCTATGACATTACTCTTGCTCTCAAAATGATTGGCCCCTGCATCTTCTCGGCTGAAGTTGGAAGACACGTGATTGGAGATAGGGAGTGGGAAGTTTACAGAATCTTGCTTGATGAGGGGGAGGGTTCATCTGTTCCGAGGAACAAGATTGAGAAAGGAGTTTGGAAGATGTTGATGGGTTGGGTGTGA 1239 0.4439 MGILHDDVVLIREAEKEGESTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVAGKQRTNWSLLKKRLIEACPSCSSASGISYYRSELQPPKPSDVFLLKFCCHDRKGLLHDITEVLSELELIIHKVKVSTTPDGRVVDLFFITDTRELLHTKKRSDDTIEQLSVVLGDPSITIDIELVGPEITACSQASSFLPSAITEDIFDLELPASLQSGTSTSDSVSIVMDNSLSPAHTLVQIICPDHKGLLYDIMRTLKDYNIQISYGRFSTKPRGKCELDLFIVQADGKKIVDPNKQKSLSSRLRTELLRPFRVTVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMIGPCIFSAEVGRHVIGDREWEVYRILLDEGEGSSVPRNKIEKGVWKMLMGWV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02389 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Vian2g02389 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
Vian2g02389 412 SUPERFAMILY ACT-like 107 181 IPR045865 -
Vian2g02389 412 SUPERFAMILY ACT-like 244 298 IPR045865 -
Vian2g02389 412 Pfam ACT domain 112 167 IPR002912 -
Vian2g02389 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Vian2g02389 412 ProSiteProfiles ACT domain profile. 247 330 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02389 Vian-Chr2 44356527 44358873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02389 - - gmx:100818216 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02389 2 44356527 44358873 Vian2g02389 2 44356527 44358873 ECH
Vian2g02389 2 44356527 44358873 Vian3g02056 3 26323574 26326142 PCT