Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02039 ATGGAGGCTGTGTGTTTAAAATCTGGGATGCTTCCCACGATCTCTATTGGTGGGTCGCTGGACGCACGTGCCAATCATTCTCAGGTGAGCACGGTGGGGCGTTCCGCTGGGGATAAACCGCCGCAAAGGTCGTTGTTTTCGAGGTTTTCCTTTCGGTATCCTTTGGAATCTCTCTGGCATCGGGGAAACAACAGCAAGCACAAAGGGCTTGCCATCGACGACGCCGTTTTGGCTGATAACGCCGAAGCGAAGGCCATTAGAGATGATGGCCAGGGTGACGAAATGGAACGCGGAAACTGGGTTTTGAAGATTTTGCGCGTGAAGTCCGTGTGGGAGGGGAAACAGCGCCATGAAGAGGAGGTCGCGGTTAATGATCAGACTCAAAGCAATTACGATGGGGAGGAAGTGTGTGAATGTGATGCTTGCGGAGTTGGGGAAGATGACAGTTACGGTGACGCAGAAGAGGCTGAATTCGATAGAGGCTCCTTTTCCAGAATGCTCCGGAGGGTATCGTTAGCAGAAGCTAGGTTGTATGCTCAGATGTCACACTTGGGGAACTTGGCTTACGATATACCGAAAATCAAGCCCGGGAAACTCTTAAAACATTATGGTTTGCGCCTTGTAACTTCATCAATAGAGAAGAAGGAATTGGCAGCAATAGCTGAAAACGATACCCAGAAAGTTGAAACTGACGAGAAGGAAGAAGAAGAAGTAAAAAAAGAGGATCCGAAGCACAGTGGGTACAACATAAGTGCAACTGCTGCTTATAACATTGCCGCCTCTGCTGCCACATATCTGCATTATCAGACTAGGAGCATATTTCCATTCAAATCCTCAAATGCAGTGACTGGTGAAGCATCACTCGGTGGAAGCAATGAGAGCTTAGACAATGACTTAATAAACTCAGAGGTGTCATCTTTGATGGCCACAACTGATTCAGTGACAGCAGTGGTTGCGGCAAAGGAGGAAGTAAAGCAGGCTGTCGCTGATGATTTAAACTCTGCACATTCATCACCGTGTGAATGGTTTGTCTGTGATGATGACCAGAGTGGTGCAAGATTTTTTGTTATTCAGGGTTCAGAGACAATGGCTTCTTGGCAAGCAAACCTGCTTTTTGAACCGATTAAATTTGAGGGGTTAGACGTCCTTGTGCACAGAGGTATATACGAGGCTGCTAAAGGGATGTATGACCAGATGTTGCCAGAAGTACATGCTCACCTAAAATCTCGAGGTTCTCGTGCAACTTTCCGTTTCACTGGGCATTCTCTTGGTGGAAGCCTGGCATTACTAGTAAATCTTATGCTGTTGATTAGGCAGGAAGTGCCTATCTCCTCTCTACTTCCCGTGGTAACATTTGGTTCCCCATCCATCATGTGTGGGGGGGATAGTCTGCTAGAAAAATTAGGTTTGCCTAGGAGTCATGTTCAAGCAATTACAATGCACAGAGACATTGTTCCTCGAGCATTTTCTTGCAATTACCCTAACCACGTTGCAGAACTGTTGAAAGCTGTCAATGGGAACTTCCGTAGTCATCCTTGTCTCAATAAACAGAAGGTACTATATACACCAATGGGTAATCTGCTGATTCTGCAGCCAGATGAGAAATTTTCACCAAGCCATCATCTCCTGCCTTCAGGCAGTGGTTTATATCTTCTGTGTTGTCCTTTGTCAGAATCCAAGGACACAGACAAGCAGCTCCGAGCTGCTCAGACGGTGTTCTTGAACTCACCTCACCCACTTGAGATATTAAGTGACCGTTCTGCTTATGGGTCTGGAGGAAGTATACAAAGAGATCATGACATGAATTCCTACTTAAAGTCTGTGAGAACTGTGATTCGCCAGGAACTTAACCAGATCCGTAAAGTCAAGAGGGAGCTACGGCGGAAGGTGTGGTGGCCTCTTGTGTTACCACGTGGAATGGATACCAGTAATGTTGCTGGGAGGTCCATGATATCAATCAAAGTAGGTCAACGTCAGTCATCCTTCTCTGGCATGATACAAACAGGTAGACAGTCCCTGAAAAGGTTCAGGAGGCTTGTTACATCCCAGCATATACATTTGTTTGTGCTGCTCTTGTTCCCTGCTCGCTTGTTACTCTTAGGGAACATACAGCCTAATTAG 2121 0.4649 MEAVCLKSGMLPTISIGGSLDARANHSQVSTVGRSAGDKPPQRSLFSRFSFRYPLESLWHRGNNSKHKGLAIDDAVLADNAEAKAIRDDGQGDEMERGNWVLKILRVKSVWEGKQRHEEEVAVNDQTQSNYDGEEVCECDACGVGEDDSYGDAEEAEFDRGSFSRMLRRVSLAEARLYAQMSHLGNLAYDIPKIKPGKLLKHYGLRLVTSSIEKKELAAIAENDTQKVETDEKEEEEVKKEDPKHSGYNISATAAYNIAASAATYLHYQTRSIFPFKSSNAVTGEASLGGSNESLDNDLINSEVSSLMATTDSVTAVVAAKEEVKQAVADDLNSAHSSPCEWFVCDDDQSGARFFVIQGSETMASWQANLLFEPIKFEGLDVLVHRGIYEAAKGMYDQMLPEVHAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRQEVPISSLLPVVTFGSPSIMCGGDSLLEKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNGNFRSHPCLNKQKVLYTPMGNLLILQPDEKFSPSHHLLPSGSGLYLLCCPLSESKDTDKQLRAAQTVFLNSPHPLEILSDRSAYGSGGSIQRDHDMNSYLKSVRTVIRQELNQIRKVKRELRRKVWWPLVLPRGMDTSNVAGRSMISIKVGQRQSSFSGMIQTGRQSLKRFRRLVTSQHIHLFVLLLFPARLLLLGNIQPN 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02039 706 CDD Lipase_3 338 494 - -
Vian3g02039 706 MobiDBLite consensus disorder prediction 223 245 - -
Vian3g02039 706 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 698 IPR043367 GO:0008970
Vian3g02039 706 Gene3D alpha/beta hydrolase 300 524 IPR029058 -
Vian3g02039 706 Coils Coil 605 629 - -
Vian3g02039 706 SUPERFAMILY alpha/beta-Hydrolases 337 527 IPR029058 -
Vian3g02039 706 Coils Coil 221 241 - -
Vian3g02039 706 Pfam Lipase (class 3) 355 492 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02039 Vian-Chr3 25887292 25890400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02039 1 701 Acyl Lipid Metabolism Gene Families AT1G02660 56.198 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02039 - - gmx:100786628 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02039 3 25887292 25890400 Vian3g02039 3 25887292 25890400 ECH
Vian2g02839 2 49282785 49285636 Vian3g02039 3 25887292 25890400 PCT