Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02839 ATGGATGCTCTGTGTTTACACAGTAGCATCTGTAAGATAGCTTCGATTACTGCAACTGCACGCGCAAATGATGATTACGCGTCGCAGTCTCAGGTGAGCGCGGTGGGACGCTCCTCCTTGTTTTCCAGATTCTCTTTTAGATACCCTTTGACGTCTTTATGGCCACAACAACACACGGGGGATGCTTCCGGCTACAATGGTCTCGCCGTCGACGACGCCGTTTTGGCGGATAATGAAACTGAAGAAGGAGAGGGACAAAACGGGAATTGGGTTATCAAGTTGTTTCATGCAAGGTCTGTTCGGAGCGGGGAACAGAGGAACGATGAAGACAAGGTTGTTGTAAATGTTCTAACGGATCAAGAAAAGGAGGAGGAAGAGTGTGATGGCTGTAGGGTTGATTATGACGACGACGACAACGAAGACAAAGAAGTAGAAAATGAAGAGGTTTTGTTCGATAGAGACTCATTTTCGAGGATGCTTCGGAGGGTGTCATTGCCCGAAGCTAAATTATATGCACGCATATCCCACTTGGGCAATTTGGCATACTCTATCCCAAAAATCAAACCAGGGATCCTCTTCAAAAACCATGGTCTGCGTTTTGTAACTTCATCCGTAGAGAAAAAGAAATTGACTGTGGCTGCAGAAAAAAACCAGACATCGACTGCAATTCAGAAAGAGGAAACTAACGACGAGGATGATGTGGGAGAAACAAAAGACAAAAAGAACGGTGGATACGTCATAGGTGCATGTACTGCATACGAGACTGCTGTTTCTGCAGCCTCTTATCTCCATGCTCAAACAAAGAGCATACTTTCATTCCCATCTTCCAATGCCGAGGAAGGTGAAGGTTCACATGAAGCAAGCAAAGAAAGCTTTAAAGGAAACAAGATGACAAGCACGGAGGAAGCAGCTCTGAAGGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGGATGTAAAACAGGCTTTTGCAGATGATTTGAGCTCGACAAGCTCTTCACCCTGTGAATGGTTCGTATGCGACGATGACGAGACTGCTACAAGATATTTTGTGATCCAGGGTTCCGAGTCATTTGCTTCCTGGAAAGCGAACCTACTATTTGAGCCAGTTAAATTCGAAGGTTTGGATGTCTATGTGCATAGAGGTATATATGAGGCTGCAAAAGGGACATATCAACAGATGTTACCAGAAATTCGTGCTCACCTAAAATCTCATGATTCCCGTGCAACTTTCCGTTTCACTGGACATTCTCTTGGGGGGAGCTTGGCATTACTCGTAAACCTTATGCTGCTAATAAGAAAGGAAGCACCATTGTCCTCTCTGCTTCCTGTCATAACGTTTGGCGCCCCATCCATCATGTGTGGAGGTGATAATCTTCTTGACAAGCTAGGATTGCCACGGAGTCATGTTCAAGCAATCACAATGCACAGAGACATAGTTCCACGAGCATTTTCTTGCAAGTACCCTAGCCATATTGCAGAACTGCTAAAGGCTCTCAATGGTAACTTCCGCAATCATCCGTGCCTTAATAACCAGAAGCTATTGTATGCACCAATGGGTGAGCTCTTCATCCTACAGCCAGACGAGAAATTTTCGCCAAGTCATGATCTTTTGCCCTCAGGCAGTGGCCTATATCTTTTGAGTGGTCACTTGTCAGAATCCAGTGACGCGTTAAAACAGATCCGGGCAGCAAAGATGGTGTTCTTGAACTCACCGCACCCACTTGAGATATTAAGTGACCGATCTGCGTATGGATCTGGAGGAACCATTCAGAGAGATCACGACATGAATTCGTACTTGAGATGTGTGAGAACCGTGGTTCGCCAAGAACTTCACCAGATTCGGAAGGCAAGGAGAGAGCAAAGGCGGCGTAAGGTGTGGTGGCCTCTGATGGTCCCACGTGGGAGTGAGAGTGCGGCAGTTGGGGGGTCCATGATATCGGTGAATATGATTAACGACCAACCTTCTCTCTTTGGCATGATTGAGACTGGGCGAGAATCATTGAAAAGGTTCGGAAGTCTGGTTGCATCCCAACACATGCAATTGTTTGTGGTGCTCCTGTTTCCTGCAAGGTTGTTACTGGTGGGAGCATGTAGCTTAATTAGCTTAAGATGA 2124 0.4605 MDALCLHSSICKIASITATARANDDYASQSQVSAVGRSSLFSRFSFRYPLTSLWPQQHTGDASGYNGLAVDDAVLADNETEEGEGQNGNWVIKLFHARSVRSGEQRNDEDKVVVNVLTDQEKEEEECDGCRVDYDDDDNEDKEVENEEVLFDRDSFSRMLRRVSLPEAKLYARISHLGNLAYSIPKIKPGILFKNHGLRFVTSSVEKKKLTVAAEKNQTSTAIQKEETNDEDDVGETKDKKNGGYVIGACTAYETAVSAASYLHAQTKSILSFPSSNAEEGEGSHEASKESFKGNKMTSTEEAALKATTDSVTAVVAANEDVKQAFADDLSSTSSSPCEWFVCDDDETATRYFVIQGSESFASWKANLLFEPVKFEGLDVYVHRGIYEAAKGTYQQMLPEIRAHLKSHDSRATFRFTGHSLGGSLALLVNLMLLIRKEAPLSSLLPVITFGAPSIMCGGDNLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPSHIAELLKALNGNFRNHPCLNNQKLLYAPMGELFILQPDEKFSPSHDLLPSGSGLYLLSGHLSESSDALKQIRAAKMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLRCVRTVVRQELHQIRKARREQRRRKVWWPLMVPRGSESAAVGGSMISVNMINDQPSLFGMIETGRESLKRFGSLVASQHMQLFVVLLFPARLLLVGACSLISLR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02839 707 CDD Lipase_3 307 485 - -
Vian2g02839 707 MobiDBLite consensus disorder prediction 215 237 - -
Vian2g02839 707 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 18 696 IPR043367 GO:0008970
Vian2g02839 707 MobiDBLite consensus disorder prediction 282 296 - -
Vian2g02839 707 SUPERFAMILY alpha/beta-Hydrolases 335 522 IPR029058 -
Vian2g02839 707 Gene3D alpha/beta hydrolase 291 521 IPR029058 -
Vian2g02839 707 Pfam Lipase (class 3) 353 489 IPR002921 GO:0006629
Vian2g02839 707 MobiDBLite consensus disorder prediction 274 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02839 Vian-Chr2 49282785 49285636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02839 1 707 Acyl Lipid Metabolism Gene Families AT1G02660 53.252 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02839 - - gmx:100788786 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02839 2 49282785 49285636 Vian2g02839 2 49282785 49285636 ECH
Vian2g02839 2 49282785 49285636 Vian3g02039 3 25887292 25890400 PCT