Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01951 ATGGATAGAGTAAGAGACTTGGCGTCAAAGAAGGCAGCAGTTATATTCACCAAGAGTTCATGTTACATGTGCCACAGCATCACGCAACTCTTCTATGAGCTCGGAGCAAGCCCTGCGGTGCATGAGCTCGACAAGGATGCTTATGGGAGGGAAATGGAGTGGGCTTTGAGGAGCATGGGGTGTAACCCTTCGGTGCCTGCAGTCTTCATTGGTGGCAAATTTGTAGGCTCATCCAAGGATGTCATATCCCTCCATGTTGATGGTTCCCTCAAACAAATGCTTATGGCTGCCAAGGCCATATGGGGAGAAGCTGAAGGAGATGCAAGGGGACAAGAGAGAGGAGGCGACATTGACATTGTTGGGGAACTGGTAGCAATAAAAAGTGTTATAAGGACATTGCTTGCAAATGTTGATGGTGATTCTAATATCATCATATTGGGAAGACACTATTTATAA 456 0.4627 MDRVRDLASKKAAVIFTKSSCYMCHSITQLFYELGASPAVHELDKDAYGREMEWALRSMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMAAKAIWGEAEGDARGQERGGDIDIVGELVAIKSVIRTLLANVDGDSNIIILGRHYL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01951 151 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Vian3g01951 151 Pfam Glutaredoxin 14 75 IPR002109 -
Vian3g01951 151 CDD GRX_GRXh_1_2_like 12 93 - -
Vian3g01951 151 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Vian3g01951 151 Gene3D Glutaredoxin 1 109 - -
Vian3g01951 151 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Vian3g01951 151 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Vian3g01951 151 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Vian3g01951 151 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Vian3g01951 151 NCBIfam glutaredoxin-like family 4 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01951 Vian-Chr3 23281361 23282459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01951 1 101 Miscellaneous Gene Families AT4G15700 47.525 6.18e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01951 K03676 - gmx:100305876 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01951 3 23281361 23282459 Vian3g01951 3 23281361 23282459 ECH
Vian2g02918 2 49886836 49890804 Vian3g01951 3 23281361 23282459 PCT