Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02918 ATGATTGCTCGAAGCCACTTCTTATATTGGATCGTTCATCTCCTTGCAATGGATAGAGTTAACGACTTGGCATCAAAGAAGGCTGCTGTTATATTCACCAAGAGTTCATGCTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAGGGAAATGGAGTGGGCTTTGAGGGACTTCCAACCCAATATAGCCACTGGATCGAATTCAGTTTGGATTCGGTCTGATGGTTTGGGAGTTCTGATAAGTCTAAGGATGGACAAGGTGAAGAGGTTGACCTCTGAAAATGGTGTGGTGATTTTCACGAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTCAAGAACTCAGGGCGAATCCTCTGGTTTATGAGATTGATCATGACCCTGAAGGCAGAGAAATAGAGAAAGCTTTGTTAAAGCTAGGCTGCAATGCTCCAGTCCCAGCTGTGTTCATCGCAGGGAAGCTAATTGGATCCACTAATGAAATCATGTCCCTCCACCTAAGAGGTTCACTCACTCCAATGCTGAAAGGCCAGCCTTTGTCTTGA 603 0.4527 MIARSHFLYWIVHLLAMDRVNDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRDFQPNIATGSNSVWIRSDGLGVLISLRMDKVKRLTSENGVVIFTKSSCCLCYAVNILFQELRANPLVYEIDHDPEGREIEKALLKLGCNAPVPAVFIAGKLIGSTNEIMSLHLRGSLTPMLKGQPLS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02918 200 SUPERFAMILY Thioredoxin-like 101 196 IPR036249 -
Vian2g02918 200 ProSiteProfiles Glutaredoxin domain profile. 17 97 - -
Vian2g02918 200 FunFam Glutaredoxin family protein 101 198 - -
Vian2g02918 200 SUPERFAMILY Thioredoxin-like 17 75 IPR036249 -
Vian2g02918 200 NCBIfam glutaredoxin-like family 104 195 IPR011905 -
Vian2g02918 200 Pfam Glutaredoxin 30 68 IPR002109 -
Vian2g02918 200 Pfam Glutaredoxin 113 175 IPR002109 -
Vian2g02918 200 Gene3D Glutaredoxin 101 198 - -
Vian2g02918 200 ProSiteProfiles Glutaredoxin domain profile. 101 200 - -
Vian2g02918 200 Gene3D Glutaredoxin 15 87 - -
Vian2g02918 200 PANTHER GLUTAREDOXIN 17 76 IPR011905 -
Vian2g02918 200 CDD GRX_family 30 79 - -
Vian2g02918 200 CDD GRX_GRXh_1_2_like 113 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02918 Vian-Chr2 49886836 49890804 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02918 17 72 Miscellaneous Gene Families AT4G15670 48.214 2.41e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02918 K03676 - gmx:100499748 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02918 2 49886836 49890804 Vian2g02918 2 49886836 49890804 ECH
Vian2g02918 2 49886836 49890804 Vian3g01951 3 23281361 23282459 PCT