Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01923 ATGATTTCTCCAAAGGAAGATCCTCTTTTTTCACAGACCGGCTTCTCCACTATGCTCAAGCTCCTCAACAAGAACATCCGCCGCCTCCTCCGCCGTCTCCGGTGGCCAATTCGCCGCCGTTCGAAGCCCAAAGTAGTAGTGATCAGCAAGCTCGGAAAGAACGCCCCAAAGGCCCAAACTGAGCCAAGCCCAAACCTTTCCGCGGCTGTTCATCCTAACGCGCAATTGGGTACTCCGAAGCCAATCCGGATCGCTACATTCAACGCCGCGCTGTTCTCCATGGCCCCGGCGCTCCCGAAAGTTGCACGCGAGTTGGGGGAGCAAAACGGCGTCGCTTCGAAGGCGAATTCGCGGCCCAGAAGCATATTGAAACATTCGCCATCGCAGTCACAATCAGTGAAGAGCAGAGCAGAGGAGAACGTTGGTAGCAGACAGAAGATGAGGGTTTCCATAAATTTACCAGACAACGAGATTTCGCTGCTGCGAAGCCGACAATCGAGCTTCTCGGAACACGACAAGGAAGGGCTGAAGGCGTGGTCGGTAGGGGGAGGTGGGGCCCACATGAGTAACAGAACAGTTGTTGAGGTTCTGAAGGAAGTGGACGCAGATGTTTTGGGTCTGCAAGATGTGAAGGCTGAGGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCTGCGGCGTTGGGAATGAACTACGTCTTCGCCGAAAGTTGGGCACCTGAGTACGGCAATGCTGTCTTGTCCAAATGGCCCATCAAACGCTGCGTCTCTCACCAAATCTTCGATCACACTGATTTCAGGAATGTTTTGAAGGCCACAATCGATGTGCCTCAAGTAGGTGAGCTTAACTTCTACTGTACCCATCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGGTAAATGCAATAATTCAATCCAGTGATGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTGGATGAATCAGATTACTCCCAAGAGAGATGGACAGATATTGTGAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGTAAAGACTACACTGATGCAAAGGATTATGCAGGGGAATGCGAGTCTGTTGTCATGATTGCCAAGGGCCAAAGTGTTCAAGGCACATGTAAGTATGGAACTAGGGTAGATTACATATTATCATCATCAAATTCTCCATACAAGTTTGTTCCTGGTTCCTATTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTGAAGGCAAATGACAACCCTGAAGAAAAGCTGACAAAGAATACGCAACAACCAAGACAGAGAGTTGTAAAAATAACACAATCCACACCCTCAAAAGGTATCTGGAAAACTCACTCTTGA 1401 0.4804 MISPKEDPLFSQTGFSTMLKLLNKNIRRLLRRLRWPIRRRSKPKVVVISKLGKNAPKAQTEPSPNLSAAVHPNAQLGTPKPIRIATFNAALFSMAPALPKVARELGEQNGVASKANSRPRSILKHSPSQSQSVKSRAEENVGSRQKMRVSINLPDNEISLLRSRQSSFSEHDKEGLKAWSVGGGGAHMSNRTVVEVLKEVDADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRCVSHQIFDHTDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKANDNPEEKLTKNTQQPRQRVVKITQSTPSKGIWKTHS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01923 466 SUPERFAMILY DNase I-like 179 427 IPR036691 -
Vian3g01923 466 FunFam Endonuclease/exonuclease/phosphatase family protein 178 430 - -
Vian3g01923 466 MobiDBLite consensus disorder prediction 110 138 - -
Vian3g01923 466 MobiDBLite consensus disorder prediction 109 145 - -
Vian3g01923 466 Gene3D Endonuclease/exonuclease/phosphatase 178 430 IPR036691 -
Vian3g01923 466 MobiDBLite consensus disorder prediction 51 74 - -
Vian3g01923 466 MobiDBLite consensus disorder prediction 56 72 - -
Vian3g01923 466 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 77 447 - -
Vian3g01923 466 Pfam Endonuclease/Exonuclease/phosphatase family 181 420 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01923 Vian-Chr3 22770764 22773919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01923 - - gmx:100801298 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01923 3 22770764 22773919 Vian3g01923 3 22770764 22773919 ECH
Vian2g02063 2 40358495 40360913 Vian3g01923 3 22770764 22773919 PCT