Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02063 ATGCTTAAGCTCCTCAACAAGAACCTCCGTCGCCTCAGCTCCCTTCTCAAGTGGTCACTACGGCGTCGTTCCAAGTCCAAGCCTAGCTTCGGCAACCCCACTCCCAAACCTCACACCGAACCTCCCCCTCCACCTTCCAAACCAATACGAATCGCTACGTTCAACGCCGCATTCTTCTCTATGGCACCGGTGCTTCCCGAACCAGACAGAAGCACCACCTCGGACGACGACAACGTGGAGCGACCAAAGTCAACGTACGACCGACCACCACGAAGCATTTTGAAACAGTCGCAGTCTCCGCTGTTGGGTAAGTCAAAGCTGCGAGTGTCGATCAACTTACCCGACAACGAGATTTCGCTGCGGCAAACGAGCTTCTCGGAGTACGAGAGAGCAAAGGGGTCGTTCTCATGGTCGTGGAGTTTCAGCGAGGGAGTGGAGGGAGAGAGAAACAGGAAAACGGTGCTTGAAGTTCTGAGAGAGGTAAACGCCGACGTTTTGGGGTTGCAAGACGTGAAGGCGGAGGAAGAAAACGGGATGAAGCCTTTGTCTGATTTGGCTCGAGCTTTGGGGATGAACTACGTCTTCGCCGAAAGCTGGGCCCCTCAATACGGCAACGCCGTTCTGTCAAAGTGGCCCATTAAACGCTGGAAGCTGCAGAAAATCTTCGACCACACCGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTACCCGAAGAAGGTGAACTGTACTTTTACTGCACCCACCTTGATCATCTTGATGAGAATTGGAGAATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAACCACACATTTTAGCTGGTGGTCTTAATTCGCTTGATGAATCGGATTATTCCCACGAAAGATGGACAGATATTGTTAAGTACTATGAGGAGATGGGAAAGCCAACACCCAAGGTTGAAGTGATGAAATATCTCAAGAACAGACACTACACAGATGCAAAGGACTTTTCAGGGGAATATGAGTCTGTTGTCATGATCGCCAAAGGACAAAGTACAACAACAACAACAACCTCTTTTATTGTTTATCTTTATGAAGGTTGGTCTTACTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTAAAAGTGAATAGAAATCCTCAAGAAAATCTGACAGAGAAGCAGGAACAACCACGACACAAAGTTCAGAGAATAAAATCAACTCCATCCAAATGTATATGGAAAACACAAACTGCAGATATAGATTGA 1260 0.4683 MLKLLNKNLRRLSSLLKWSLRRRSKSKPSFGNPTPKPHTEPPPPPSKPIRIATFNAAFFSMAPVLPEPDRSTTSDDDNVERPKSTYDRPPRSILKQSQSPLLGKSKLRVSINLPDNEISLRQTSFSEYERAKGSFSWSWSFSEGVEGERNRKTVLEVLREVNADVLGLQDVKAEEENGMKPLSDLARALGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHTDFRNVLKATIDVPEEGELYFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSHERWTDIVKYYEEMGKPTPKVEVMKYLKNRHYTDAKDFSGEYESVVMIAKGQSTTTTTTSFIVYLYEGWSYLVLSSKGTSDHHIVKVDVVKVNRNPQENLTEKQEQPRHKVQRIKSTPSKCIWKTQTADID 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02063 419 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 47 394 - -
Vian2g02063 419 MobiDBLite consensus disorder prediction 70 88 - -
Vian2g02063 419 SUPERFAMILY DNase I-like 45 377 IPR036691 -
Vian2g02063 419 MobiDBLite consensus disorder prediction 23 48 - -
Vian2g02063 419 Pfam Endonuclease/Exonuclease/phosphatase family 151 289 IPR005135 GO:0003824
Vian2g02063 419 Gene3D Endonuclease/exonuclease/phosphatase 136 379 IPR036691 -
Vian2g02063 419 FunFam Endonuclease/exonuclease/phosphatase family protein 139 380 - -
Vian2g02063 419 MobiDBLite consensus disorder prediction 64 99 - -
Vian2g02063 419 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02063 Vian-Chr2 40358495 40360913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02063 - - vra:106757483 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02063 2 40358495 40360913 Vian2g02063 2 40358495 40360913 ECH
Vian2g02063 2 40358495 40360913 Vian3g01923 3 22770764 22773919 PCT