Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01917 ATGAATTTCTTCAAATCCGTTTTCCTTGATGACCCGGATCCTCCGCGACCCGAATCCGGATCCAGCAATGAGCCGCGAGACCAGGACCCGGATCCCGATTCCCCGCCCCCATCGAATACCACCGATTCCGTTGTCGGTGTCGGCGACGGTTGGAATTTCGGCGGCTTCATGAAAACCCTAACAACTAAATCGGAATCCATTATCGAGACCTACCGTCGCGATCTGCAGGAATTCAGCACCGGTTTGAAGAAGGAAATTGAGGTGGCGCAGGGTTCTCTCGGGACCGTGGGTCACGTCATTGACGAGTTCGGAAACACCGTCGTCAAAGGAACGGCTCAGATCATATCTCAAGGTAAGGACGCTATCCTCGCTGTCGATCTGGATTCTGATTCTGATAATAATAGCGCCAATAGGAAGAGCCTGGATTTGACGCGGTATAGTAGGTTCGACGCTCAGATTCGTGCGATTCAGGGTGATGTTAGCACTTACTCCGAGGAGCCCGAGGATGTGAGTGAGTTCAATGAATGGAAATTAGGGTTTTCGTTGGAGGGGAAAAGTGAGGAAATGGAGGGGCTTTTCAGAGAGAATGATAATATGGAGAGTGTTTACAAAAGAGTTGTTCCGAGCAGTGTGGATCACGACACTTTCTGGTATAGGTATTACTATAAGGTTTATAAGCTCAAGAAAGCTGAAGACCTGAGGGCTAGGCTTGTGAGTGGAATTTCTGGGGAGGATGAGGATTTGAGTTGGGAAGTTGAAGATGATAATGAAGATGAGGATGGAGGTGTTGCTAAACCTGTGGTTTTGAATAAAGAGGTTGGTGGGGACAGTGTGGATACCCAGTTGCGCGTTGCCGGCGATGAAGGGGGAACGAAAAAATTGGACGTGGAAGAAGAGTCTAAAGTAGAAAAGAGAGACAATTTATTGCAAAGTGAGCAAGTTGGCAACAAGATAGATAAGTCCGTTGAGGAGCCACATATTGAGAAATCTGAAATTGTTGGTGAGATGGCTGGTGTTGATGAGGCATCAAAAGTGGATGTTGGTGTGAGCAAGAATGATCCTGCAGCTGAAACTGATGAGAAGGCGAAGGAAACGGAGGGTGGTCATGAGAAATCTTCCAGTAAAAGTAATGACTCCTCAGTGGTTGAAATTAAGCACTCGGCAAATGAGGATGGGGATGAGGAGGACCTTGGTTGGGATGATATTGAGGATCTTAGCAGTATTGATGTGAAGGAAACATCGCATAGTGGTGGCACAAGCAAAGTTGATTTGCGGAAGCGATTTAGTGCTGCGGAAGAAGAGGAAGACTTGAGTTGGGACATTGAAGATGATGATGATGAGCCTCCCAAGGTTTGA 1356 0.4735 MNFFKSVFLDDPDPPRPESGSSNEPRDQDPDPDSPPPSNTTDSVVGVGDGWNFGGFMKTLTTKSESIIETYRRDLQEFSTGLKKEIEVAQGSLGTVGHVIDEFGNTVVKGTAQIISQGKDAILAVDLDSDSDNNSANRKSLDLTRYSRFDAQIRAIQGDVSTYSEEPEDVSEFNEWKLGFSLEGKSEEMEGLFRENDNMESVYKRVVPSSVDHDTFWYRYYYKVYKLKKAEDLRARLVSGISGEDEDLSWEVEDDNEDEDGGVAKPVVLNKEVGGDSVDTQLRVAGDEGGTKKLDVEEESKVEKRDNLLQSEQVGNKIDKSVEEPHIEKSEIVGEMAGVDEASKVDVGVSKNDPAAETDEKAKETEGGHEKSSSKSNDSSVVEIKHSANEDGDEEDLGWDDIEDLSSIDVKETSHSGGTSKVDLRKRFSAAEEEEDLSWDIEDDDDEPPKV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01917 451 MobiDBLite consensus disorder prediction 353 373 - -
Vian3g01917 451 SUPERFAMILY BSD domain-like 145 234 IPR035925 -
Vian3g01917 451 PANTHER SYNAPSE-ASSOCIATED PROTEIN 18 400 - -
Vian3g01917 451 SMART wurzfinal6 176 228 IPR005607 -
Vian3g01917 451 MobiDBLite consensus disorder prediction 275 451 - -
Vian3g01917 451 MobiDBLite consensus disorder prediction 286 310 - -
Vian3g01917 451 Gene3D BSD domain 138 240 IPR035925 -
Vian3g01917 451 Pfam BSD domain 176 232 IPR005607 -
Vian3g01917 451 MobiDBLite consensus disorder prediction 404 434 - -
Vian3g01917 451 MobiDBLite consensus disorder prediction 1 46 - -
Vian3g01917 451 MobiDBLite consensus disorder prediction 317 335 - -
Vian3g01917 451 ProSiteProfiles BSD domain profile. 176 228 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01917 Vian-Chr3 22631105 22632460 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01917 - - gmx:100792113 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01917 3 22631105 22632460 Vian3g01917 3 22631105 22632460 ECH
Vian2g02066 2 40373086 40374390 Vian3g01917 3 22631105 22632460 PCT