Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02066 ATGAATTTCTTCGCATCCGTTTTCTCCGATTCCGACAATGCGCACCAAAACGAATCGCAAGAGGAAGCGAATAGCGATTCCTCGTCGCCGGAGAGCCGTTCCGATTCCACCGGCGCCGGTGCATGGGAAATCGGAGATCTTTGGAAAAGGCTGAGCGCGAAATCGGAATTGATCATTGAGACCTACCGTCGCGACTTGCAGGAATTCGGTACCGGCTTGAAGAAGGAGATTGAGGTGGCTCAGGGTTCTCTCGAGACGGTGGGCCACGTCATCGACCAGTTCGGGAACACCGTCGCGAAAGGTACCGCTCACTTTATATCTCACGGCAAGGACGCCATCCCCGTCGATTCCGGGTCCGATAGTAATGTTAATACCAAAAACAAGACGGAAAAAAAGAGCTTCAATTCGAGGCGCTACAGTAGGTTTGAGGCTCAGGTTCGGACCATTCAGGGTGACGTTAGTACTTACACCGAAGTGCCTGAGGATTTAGATGGGTATGAGAAGTGGAAATCGGGGTTTTCCTTGGAAGGGAAGAGCGAGGAAATGGAAGAGTTGCTGAGAGAGAATGAGGGTATGGAGAGTGCTTACAAGAGGATTGTGCCTAATGTTGTTGACCGTGATGCGTTTTGGTTTAGGTATTATTATAGAGTTTATAGGTTTAACAAAGCTGAGGATATGAGGGCCAGGCTCGTGAGGAGAATGTCGAGGGAGGAGGAGGAGTTGAGCTGGGATGTTGAAGATGATGAGGAGGAGGAGGTGGACGAAAATAATAAGCGGAAAGAAGGAAATTCTAATGGAACAGGAAGATCGAACGTGGAGCAGATGTATAAGTCTTATGAGGAGGGGTCTAAGGAAGGAAAGAGAGGTGATTTATTGCATAGCAGGGGAACGGGTGATAAGAAGGATGAGTCTGTTGAAGAATCAAAGGTTGACAGTAGTGGAAAGGAAATGGGTGATGGGAGAAAGAAAAAAGAGGACGCAGTGGATGACACTGGTAACATGAATGATTCTGGTGTAGATTCTGATAAGAAAGTGGTCATGGAACAGAAAATTGATAATGGAAAAGATTCATCGGTGGCAAATACGCACCCTGGGAATGAGAATGAGGAGAAGAAGGAGGAGGAACTTGAGTGGGATGAGATTGAGGATCTTAGTGGAATTGATGAAGAGAAGGCAATTCAAACAGGGAACCCAACCAAAGTTGATTTGCGGAAGCGCCTCAGTTCTGCACAACAACAACAAGAAGACTTGAGTTGGGATATTGAAGATGATGATAATGATAAGCCTGCTAATGCTAAGGTTTGA 1305 0.4682 MNFFASVFSDSDNAHQNESQEEANSDSSSPESRSDSTGAGAWEIGDLWKRLSAKSELIIETYRRDLQEFGTGLKKEIEVAQGSLETVGHVIDQFGNTVAKGTAHFISHGKDAIPVDSGSDSNVNTKNKTEKKSFNSRRYSRFEAQVRTIQGDVSTYTEVPEDLDGYEKWKSGFSLEGKSEEMEELLRENEGMESAYKRIVPNVVDRDAFWFRYYYRVYRFNKAEDMRARLVRRMSREEEELSWDVEDDEEEEVDENNKRKEGNSNGTGRSNVEQMYKSYEEGSKEGKRGDLLHSRGTGDKKDESVEESKVDSSGKEMGDGRKKKEDAVDDTGNMNDSGVDSDKKVVMEQKIDNGKDSSVANTHPGNENEEKKEEELEWDEIEDLSGIDEEKAIQTGNPTKVDLRKRLSSAQQQQEDLSWDIEDDDNDKPANAKV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02066 434 MobiDBLite consensus disorder prediction 401 416 - -
Vian2g02066 434 MobiDBLite consensus disorder prediction 278 331 - -
Vian2g02066 434 ProSiteProfiles BSD domain profile. 169 221 IPR005607 -
Vian2g02066 434 Coils Coil 220 251 - -
Vian2g02066 434 Gene3D BSD domain 131 233 IPR035925 -
Vian2g02066 434 Pfam BSD domain 169 225 IPR005607 -
Vian2g02066 434 SMART wurzfinal6 169 221 IPR005607 -
Vian2g02066 434 MobiDBLite consensus disorder prediction 1 39 - -
Vian2g02066 434 MobiDBLite consensus disorder prediction 372 386 - -
Vian2g02066 434 Coils Coil 175 195 - -
Vian2g02066 434 SUPERFAMILY BSD domain-like 139 226 IPR035925 -
Vian2g02066 434 MobiDBLite consensus disorder prediction 1 36 - -
Vian2g02066 434 MobiDBLite consensus disorder prediction 237 434 - -
Vian2g02066 434 PANTHER SYNAPSE-ASSOCIATED PROTEIN 12 383 - -
Vian2g02066 434 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02066 Vian-Chr2 40373086 40374390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02066 - - pvu:PHAVU_001G147700g 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02066 2 40373086 40374390 Vian2g02066 2 40373086 40374390 ECH
Vian2g02066 2 40373086 40374390 Vian3g01917 3 22631105 22632460 PCT