Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01910 ATGGCGCCTAGCCGCAGAAAGGGCGTCAGTAAGGCGGCGGCGGCGGCTGCCGCCTGCCGGCAGTGGAAAGTGGGCGATCTTGTGCTAGCCAAAGTCAAGGGCTTCCCTGCATGGCCTGCCACGGTAAGTGAGCCAGAGAAGTGGGGTTACTCTACTGATTGGAAGAAGGTGCTTGTTTACTTCTTTGGAACGCAACAAATAGCATTCTGCAATCCTTCTGATGTAGAAGCATTTACTGAGGAGAAAAAACAGTCTCTTCTTGGAAAACGTCATGGAAAAGGTGCTGATTTTGGTCGTGCTGTTCAGGAGATAATTGACAGTTTTGAGAAATCAAAAAAGGAATCTCAGATTGATGAAACTGGCCTTGTTGGCGATGTTGCTGATGCAGATATTTCAAATCCTGTTAACTCATCTGCCAAGGATCAGACAGATACCCCCGAGTTGACGCACACATTACCTAAGAATTCTTCAGATTCTATTACCAACAAACATGAAGAGGTAGTAGGTGCAGCTGAGGATGAATCAGCTGCTGTATATAAAGATGAATTTGATAATAAGGAGGCAATATTGGGGGAGCCTACTGATAAGGTTGCTGTGGTAAAATCTCCTAAGCCAGTTACTTATTCTACTCGAAAAAGATCTGTGACTGACTTATGCCTGCAGGGTTGTGTAATAGAGAAACATACCTCAGTAAGAAGGTCTAGAAATCCATTGCGTGCCCAAAACTTTGTGTTGCATTATAATGACGGTGTACAGGGTGCTGGTGACCCATCAACTACTGCAGCCCAGACTGCATGTACGCGAAGGAATAAATGTGTTAGGAAGTCTCCTGATCTTTCTGGATGTGATGATTTTGAGTCATCTGCTTTTGTCTCGAATGGTAGCATGGAGGACAACAGTTCTGAAATTATGACAACTGATTCTGATACATTTAGTTTGAATGAGGGTAGTACAATAGATTCAAATTTTAAACTTGAACTCTCGGAAGCTGTTGAATGTTCAGAAGTTGAGTTGAGAGGGCTTGGTCTGAAAATAAGACCTGTAGTCAATAAGAAAAAAAGAAAACCCAATAGGAAAAGGGCAATTAATGATGCTTCTAAGCCAACCTGTAGGACAGAGGAGGAGGCTGGCTTGCAGAATGCCAGTCAAAGTTCACAGAATATTTGTGAAAATTCAAAAGGAAGATGCTTTGAACAAGATGGGGATGAGCACTTGCCCCTTGTCAAACGAGCAAGAGTCAGGATGGGTAAATCATCTGTGGAGGCAGAACGTCATAGCACTCTCCAATCTCAAGAAAACTACTGTAAGGAAGATACTATTACTAACTCAGCACATCAGATTATCACATCTTCAAATTGTGAGAATGGTAGCCCTGCTGATGGAGACTCATATGTACTGAATGGAGCTCTGGATAATGTTTCTCCAAAAATCTCAGTTCCGTGTTCCGATACTCAGATATGTAATACTAAGAAAGATCAAACATTCAGCTCTGTGGATGGTGAAGCTGCTTTACCTCCATCTAAACGCCTCCATCGAGCTTTAGAAGCCATGTCGGCTAATGCTGCTGAGCTAGGCCAAGCTCATATGGAAGCTTCATCATCCACCATAATGACAGCAAATGGTATGTGCTGTATATCTGCTGTGAAGAGATGTCCGAGTATTACCATTAATAATCAAGAATGTAATGATTTTGGGCTGCAAAAGTTGGATACTTTCAACATTGATTCGTCTCATATCAATGTGAATTCAACCAATTCAAATCCAATGATTTTATCTGAGAATAAATCACCTATTCAAGTGGGTAAGCAACAGCATGAAACCAGCAATGATATTCTCCCAGGTGCCACCACTCAAGTTGTTGAAGAGCTTAGTGATCATATGGTTTGCCAAGAAGCTGATTTAAAAATTCAGTCAAATGGAGAAAATTGTCCTATTGTTGATACAAAATGTTGTGATGAAGAAAGCATTCAATATTCACCAGATCCATCATTGCTACCGAACAATGAAGACCACATTAGAACTTTGAGTCATTCAAATTCAGCATCTGATGCATCAGGGAAAAATGGAATAAGCCTTGACCCTGTGATGGGTGTGAATGAAAATGATCCTTTATTGCCTCATAATGTTGATATGCCTCGGAATGAGGTTGCTGTACGTGAGGATACAGAATGCTTCAAGCCAGCAGTTGATGATATTGGCACAGCAAATGATATGCACGAGGTTGTGAAAGAGGTAAAATGTCAAGTTCCACAGGAGGATATGAATTCTGTCTCAACATCTGATGACTGTCTGGGTGACAAGGGTATTTCAGACATTCGGTCAAGTCCATCCTTAACCGATGGGGGTGATTGCATTCCGCAAGGATCTCCTCCAACTACTTCTGTTTGCAATGTTTCTACATCAGACAGTAGTAATATTCTTCACAATGGAAGTTGTAGCCCTGATGTACATTTACACCAGAAGCAAACTTTATCTGGTCCTTTTGATGGATGTAAAGATGGTTATGTTGCAACTCAACAGTCAAGATGTATAGGGAAGTCAACTGAGGCAGGACGAGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGTATTGCAGATAAGGTGATGGAAATTCTTGCTCATTGTCTGGAAATGGAGTCTACAATGCATCGGAGGGTGGATTTGTTTTTTCTTGTTGACTCAATTGCACAGTTTTCTCGTGGCTTAAAAGGTGATTTTTGTGGGGTATATTCGTCTGCTATCCATGCAGTCCTTCCACGACTGTTATCTGCTGCTGCTCCTCCTGGAAATACTGCACAAGAGAACCGTAGGCAGTGTCTTAAGGTTTTAAGGCTGTGGTTGGAGAGAAAAATCCTACCAGTGCACGTAATCCGCCGTCATATCCGGGAACTATCTTTATACAGCAATTCAGCTGCTGCTGGTGTGTTTATGCGTCGTTCGATGAGAACAGAGAGGGCATTGGATGACCCTGTTAGAGAAATGGAGGGCATGCTTGATGAATATGGAAGCAACTCAACTTTTCAGCTGCCTGGATTCTGCATGCCCCGGATGCTTAAAGATGAAGATGAGGGTGAATGGAGTGATTCTGATGGTGGGAACTTTGAGGCTGTCACGCCAGAGCATACTTCTGAAGTACTAGAAATGAGTTCTGCAATTGAAAAACACAGGCATATCTTGGAAGATGTTGATGGTGAACTTGAAATGGAAGATGTAGCTCCCTCAAATGAAGTTGAAATCAATTCGACTTCTGATGTTGGTGGAGAAACTGCAAAGCAGTTTGAGAAGAATCTGGCCCCGCCCTTTGCTCCTCTACATCAGGATGTGCCTTCATCTTCCCCACCACCACCACCACCGTCATTCCTTCCTCCACCACCTCCTCCACCCCCACCCCCACCCCCAGTTCTACACCACATGCCATCTACCTCTGATCCATATAACACTGTTTCACAGACTCTTAAAGACAACCCACTTCCCTCTGTGGTTCAGCCCATGGCTGCCCCTCGGCATAACCAACCTATCAATGATGCAGTGCACAATCGAGTCCCTGAATACAGAGACATGCACATGCCAGAATCTACTTGTTCTTTCAACCGTTTTCCTGTACCTCCTCCAGACAGTTATGGACATACTGATGGTGTTGCTATGCGTAATAAGGGGTATTCTATTCGACCACCTCAACATGTGCCGTCCAATCAGTTTTCTTTTGTTAATGGGGAGCGGCATGTGGAACATCGAAGGGAGGTTCCACCACCCCCTCCTTATTCTAGTAGGCAGCACTTTATGCAGAACATGGAGAGAGAGAACTTCTATAATAATAATCATGAGAGAATAAGACCACCTCCTTATGATTACCATGAGAGATGGAATATTACTACACCTTTTCCCGGTCCTCGATATCAGGAAAAAGGTGTGCCTGCTCCTTATGGTTGTCATCCGTGTGAATCTACCAGAATACCAGATCATGGGTGGAGATTTCCTCCTCGCTCTATGAATCAGAGGAACTCCATGTCCTATAGACCACCATTTGAAGACGCAATTCCAGTTTCAAACAGAGGTCCAAGCTTTTGGCAGCCTAGGTGA 4149 0.4336 MAPSRRKGVSKAAAAAAACRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDWKKVLVYFFGTQQIAFCNPSDVEAFTEEKKQSLLGKRHGKGADFGRAVQEIIDSFEKSKKESQIDETGLVGDVADADISNPVNSSAKDQTDTPELTHTLPKNSSDSITNKHEEVVGAAEDESAAVYKDEFDNKEAILGEPTDKVAVVKSPKPVTYSTRKRSVTDLCLQGCVIEKHTSVRRSRNPLRAQNFVLHYNDGVQGAGDPSTTAAQTACTRRNKCVRKSPDLSGCDDFESSAFVSNGSMEDNSSEIMTTDSDTFSLNEGSTIDSNFKLELSEAVECSEVELRGLGLKIRPVVNKKKRKPNRKRAINDASKPTCRTEEEAGLQNASQSSQNICENSKGRCFEQDGDEHLPLVKRARVRMGKSSVEAERHSTLQSQENYCKEDTITNSAHQIITSSNCENGSPADGDSYVLNGALDNVSPKISVPCSDTQICNTKKDQTFSSVDGEAALPPSKRLHRALEAMSANAAELGQAHMEASSSTIMTANGMCCISAVKRCPSITINNQECNDFGLQKLDTFNIDSSHINVNSTNSNPMILSENKSPIQVGKQQHETSNDILPGATTQVVEELSDHMVCQEADLKIQSNGENCPIVDTKCCDEESIQYSPDPSLLPNNEDHIRTLSHSNSASDASGKNGISLDPVMGVNENDPLLPHNVDMPRNEVAVREDTECFKPAVDDIGTANDMHEVVKEVKCQVPQEDMNSVSTSDDCLGDKGISDIRSSPSLTDGGDCIPQGSPPTTSVCNVSTSDSSNILHNGSCSPDVHLHQKQTLSGPFDGCKDGYVATQQSRCIGKSTEAGRAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIADKVMEILAHCLEMESTMHRRVDLFFLVDSIAQFSRGLKGDFCGVYSSAIHAVLPRLLSAAAPPGNTAQENRRQCLKVLRLWLERKILPVHVIRRHIRELSLYSNSAAAGVFMRRSMRTERALDDPVREMEGMLDEYGSNSTFQLPGFCMPRMLKDEDEGEWSDSDGGNFEAVTPEHTSEVLEMSSAIEKHRHILEDVDGELEMEDVAPSNEVEINSTSDVGGETAKQFEKNLAPPFAPLHQDVPSSSPPPPPPSFLPPPPPPPPPPPPVLHHMPSTSDPYNTVSQTLKDNPLPSVVQPMAAPRHNQPINDAVHNRVPEYRDMHMPESTCSFNRFPVPPPDSYGHTDGVAMRNKGYSIRPPQHVPSNQFSFVNGERHVEHRREVPPPPPYSSRQHFMQNMERENFYNNNHERIRPPPYDYHERWNITTPFPGPRYQEKGVPAPYGCHPCESTRIPDHGWRFPPRSMNQRNSMSYRPPFEDAIPVSNRGPSFWQPR 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01910 1382 MobiDBLite consensus disorder prediction 131 158 - -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 772 795 - -
Vian3g01910 1382 Pfam CID domain 858 980 IPR006569 -
Vian3g01910 1382 CDD PWWP_HULK 25 113 - -
Vian3g01910 1382 Gene3D - 13 119 - -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 1163 1179 - -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 1129 1161 - -
Vian3g01910 1382 Gene3D - 856 994 IPR008942 -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 352 386 - -
Vian3g01910 1382 Pfam PWWP domain 25 108 IPR000313 -
Vian3g01910 1382 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 116 161 - -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 660 687 - -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 659 688 - -
Vian3g01910 1382 ProSiteProfiles CID domain profile. 850 991 IPR006569 -
Vian3g01910 1382 SMART 558neu5 857 988 IPR006569 -
Vian3g01910 1382 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1092 - -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 1355 1382 - -
Vian3g01910 1382 MobiDBLite consensus disorder prediction 1123 1179 - -
Vian3g01910 1382 SMART PWWP_4 22 79 IPR000313 -
Vian3g01910 1382 SUPERFAMILY Tudor/PWWP/MBT 19 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01910 Vian-Chr3 22454293 22470805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01910 - - var:108325905 2707.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01910 3 22454293 22470805 Vian3g01910 3 22454293 22470805 ECH
Vian2g02079 2 40490059 40502003 Vian3g01910 3 22454293 22470805 PCT