Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02079 ATGCCGCCTAGTCGGAGAAAGAGCGGAAAAAAGGCGGCGGCGGCTGCCGCCGCTTGCAGTCAGTTTAAGGTCGGCGATCTCGTGCTTGCTAAGGTTAAGGGATTCCCTGTTTGGCCTGCGACGGTGGATGAGCCGCAGAAGTGGGGTTACTCTGCTGATCGGAAGAAAGTATTTGTTTACTTCTTTGGAACCCAACAAATAGCATTCTGTAATCCTACCGATGTAGAAGCATTTACTGAAGATAAGAAACAATCTCTTGCCAAACGTCCAGGAAGGGGTGCTGATTTCGCACGTGCGGTAAAGGAGATTATTGAAAGTTATGAAAAATTGAAGAGTGATAATCTAGATGATGACACTAGTTCTGATGGGGAAGTTGCCATTGCAAATTTATCAAATCCACTTGATCCATCTGCAAACCTATGGTCAAAGGATGAGATCGAGGCTCCTTTGGAAATTAATTCACAAAAGGAATCTTCAAATTGTGTGATTGGCAGACCTGAGGTAGTTTGTGCAGCTGAGGATGCTGTTGCATTGAGGAATGAGTCGTATAATGTAGAGGCATCATTGGATGAACCTATTGATAATGCTACTGTGACTGCAACTGTAAAATCACCTTTTCCAATTACCCTGAGAAATGAACCAGCTCGAAGGATTAGAAGCACATTACAGGTCCAAGCCTTTGTTGTACCTTCTAATGATGGTGAAAATATCGGTGATTGTAATAGTGATGACTATGTATTAGCTGATGCAATTCAGAGTATGGATATACGAAGGTGTAAACATACCAGGAAATCTCCTAATATCTTAGGTTGCGATGATACTGATTCACTTGCATTTGCCTCAAATCTTAGCATGGAGGATAATGGTTCTGAAATTATTACTGTAAATTCTGATGCCTTTACTTTACATGACGGAAGTACAATAGATTGTAATTTAAAACTTGAACAGTCTGAGCCTTTTGAGTGCCTTGAAGGTGAAGATGATTTTAACAGAGGTCTTGATCTAGAAATAAAGACTATAATCAGCAAGAAGAAAAGAAGACCAAATAGGAAGAAAGAAACTAATGATGCTGGTGCACTGAATGCCAGTCAAATTTTGCTGAATATGAGTGAAAATTCAAAAGAGAGATACCCTGACCAAGATGGAGATGAACACTTGCCCTTGGTGAAACGAGCCAGAGTTAGAATGAATAAATCATCAGCAGAGGCAGAACTCAATAGCACTATAGAAGTCCAGGTGAGGAGTGGTGACGAAGATATTACTGACTCACCACATCAACTAACCACATCCTCAAATTGTGAAAATGGTAGCCGTACTGAAGTAGGCTCATTAGTCTTGAAAGAAGCTTTGGTTAATGTTTCTCCTTCTAACTTAAAAGCTCCATGTTCAGAAAATGGTTCTCATATTTGTAAAATTAAGAAAGACCAAATGATTGGCTTTTCTGTGAATGATGAAGCTGCTCTGCCTCCATCTAAACGGATCCATCGTGCTTTGGAAGCAATGTCTGCCAATGCTGCTGAAGATGGTCAAGCTTGCATGGAATCATCATCCTCTATAGTGGCATCAACTGGTAGGTGCTGTATATCTACTATGAAGAAATGTCCTTGTATGACTGATAATAATGAAGGAGGTAACGATTTAGAACTTCAAAGGTTGGATTCTTGTGGCATTGATTCTTCTCATGTTAGTGTATGTAGTTTCTCAGCTCGTTCAAATACAATTATTTCCATAGAGAATGAGTCATCTATAGAAGTGGATGAGCAGTTGGCCAAGTACGAAAATGAAATTGGGAAGGATGCCATCCCTGGTGATAGACAGCAAGTTGGTGAAGATCTTAGTGATTCTGTTGTTTGTTTTCCTTCCAAAATAGTTTCTCAAATTCACTTACATGGCAAAATTTCTCGTAATCCTGATATGAAATGTTGTCAAGTTGGAAGCAATCAAGATTCACCAGGTCCATCCTTGTTACCAAATTGTGATGGCAACATCAGGCCTTTGAACCATTCAGATGCATCGGATACATTAGAGCATGGCGGAATAAGTCTTGATCCTGTGTTCGGGGACAGTGAAAGTGATAAATTATTACCTCAAAACAGAATTAACGTGCCCCAAAATGTGGTGGTTGTTTGTGAGGATGTGAAGCAAGTAGTTGGTGACAGCAAAAAAATTAATGACACGCATGAGATTGTTAAAGAAGTGAAATTTAAAGGACAAGAGGAGGATATGAATTCTGTTTCAATATCAAATGATTATTCAGGTGAAAAGGGTAATTTAGGGATTGTGTCAAGCCCATCTTTGACTGATGGCAGAGTCTGCCTTCCACCAGGTTCACCTCCAAACACAACACCAGTCTGCAATATTTCTACATCAGACAGTAGTAATATCCTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAAAAAAACACTTTATCGGGTCCTACTGATGGATGGAAAGATGGGATTGTGGCAAATGAACGATCAAGATCTGTGGGCAAGTCAACTGAAGCAGGAGGTGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATTGCTATTGACTGTGCAAAGTTTGGCATTGCAACTAAGGTGGTTGAAATTCTTGTTCGTAGTCTGGAAAATGAGACGAGCCTGCATCGGAGGGTGGATCTGTTTTTTCTTGTTGATTCTATTGCTCAATGTTCTCGAGGGTTGAAAGGAGACATTGGTGGAGTGTATCCATCCGTCATGAAAGCAGTGCTGCCACGTCTATTGTCTGCAGTTGCACCTCCTGGAAATGCTGCAAAAGAAAATCGTCGTCAGTGTCTTAAGGTATTAAGGCTGTGGTTGGAGAGAAAAATCCTTCCTGAATCCATTATTCGGCATCATATGCGGGAAATAGACTCATACAGCACTTCAGCTTATGCAGGTGTCTTCTCACGCCGTTCATCAAGAAGAGACAGGCCTTTTGATGACCCTGTCAGAGACATGGAGGGCATGCTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCCCGAATGCTTGAAGATGGAGGAAGTGATTCTGATGGAGGGGAGTTTGAGGCTGTTACTCCTGAGCATGATTCTGAAACACATGAAGTGCAAGAAATGGCTCATGCAATTGAAAAACGCAGGCATGTGTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTGTTGATATTGAATTAAATTCAATTTGTAATGTTGATAGAGTAAATGTCCCAGAGTTTGAGACGAATCTTATGTCATTTGCTCCTCCTTTGCCACAAGATGTTCCACCGTCTTCCCCACCACCACCTTCATCTCCACCACCACCACCACCACCACCTCCTCCTTGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGTTCCTCTACCTGCAACCCCATCTACTGCACAGCTCACATCAGCTACCTCTGATCAATTTCATGTTGCAGTTGATTCAAAAGGTTTTGAAGATTCACTGACCGTGAAAGCCAATGCACTGCATCCTATGGCTCAGTCCTTTGCTGAACCAAGAAACGGTCAACCTGCCAATGAGGCAATGCAGTATACTGTCCATGAATGTAGAGACAAGCAAATGCAGATGCAGGCATCTACTTGCTCTTTCAACACTCTCCCTATACAATCAACCGACATTTCCAGGAACGCTGATGGTGGTACTATGCATAATAAATGTTACTCGATACCACCACCTCACCATGTGCCATCTAATCAGTTTTCTTTTGTTCATGGGGAACATCGTATGAAGTCTCAAAGGGAGGTTCTGCCACCCCTTCCCTATTCCAATGATTACCACTTTGTGCCGAGTATGAAGAGAGAATTTGGTTACGAAAATCATGAGAGATTAAAACCTCCTTCATGTGATTACCAAGAGATATGGAATGTTCCTCCTTCTTATGGTCCGTGGTATCATGATAGAGGTGTGACTGCCCCTTATGGTTGTCATCCAAATGAACCAGCCAGTTTTCCAGGTCATGGATGGAGATTTCCTCCCCCAGCACTGAATTACAGGGACTCCTTGCCTTTTAGACCTCACTATGAAGATGCAATTCCAGTAGCAAACCGAGGCCCAAGCATTTGGCAGCCCAGGTGA 4176 0.4227 MPPSRRKSGKKAAAAAAACSQFKVGDLVLAKVKGFPVWPATVDEPQKWGYSADRKKVFVYFFGTQQIAFCNPTDVEAFTEDKKQSLAKRPGRGADFARAVKEIIESYEKLKSDNLDDDTSSDGEVAIANLSNPLDPSANLWSKDEIEAPLEINSQKESSNCVIGRPEVVCAAEDAVALRNESYNVEASLDEPIDNATVTATVKSPFPITLRNEPARRIRSTLQVQAFVVPSNDGENIGDCNSDDYVLADAIQSMDIRRCKHTRKSPNILGCDDTDSLAFASNLSMEDNGSEIITVNSDAFTLHDGSTIDCNLKLEQSEPFECLEGEDDFNRGLDLEIKTIISKKKRRPNRKKETNDAGALNASQILLNMSENSKERYPDQDGDEHLPLVKRARVRMNKSSAEAELNSTIEVQVRSGDEDITDSPHQLTTSSNCENGSRTEVGSLVLKEALVNVSPSNLKAPCSENGSHICKIKKDQMIGFSVNDEAALPPSKRIHRALEAMSANAAEDGQACMESSSSIVASTGRCCISTMKKCPCMTDNNEGGNDLELQRLDSCGIDSSHVSVCSFSARSNTIISIENESSIEVDEQLAKYENEIGKDAIPGDRQQVGEDLSDSVVCFPSKIVSQIHLHGKISRNPDMKCCQVGSNQDSPGPSLLPNCDGNIRPLNHSDASDTLEHGGISLDPVFGDSESDKLLPQNRINVPQNVVVVCEDVKQVVGDSKKINDTHEIVKEVKFKGQEEDMNSVSISNDYSGEKGNLGIVSSPSLTDGRVCLPPGSPPNTTPVCNISTSDSSNILQNGSCSPDVHQKNTLSGPTDGWKDGIVANERSRSVGKSTEAGGAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIATKVVEILVRSLENETSLHRRVDLFFLVDSIAQCSRGLKGDIGGVYPSVMKAVLPRLLSAVAPPGNAAKENRRQCLKVLRLWLERKILPESIIRHHMREIDSYSTSAYAGVFSRRSSRRDRPFDDPVRDMEGMLDEYGSNSSFQLPGFCMPRMLEDGGSDSDGGEFEAVTPEHDSETHEVQEMAHAIEKRRHVLEDVDGELEMEDVAPSVDIELNSICNVDRVNVPEFETNLMSFAPPLPQDVPPSSPPPPSSPPPPPPPPPPCPPPPPPPPPPPVPLPATPSTAQLTSATSDQFHVAVDSKGFEDSLTVKANALHPMAQSFAEPRNGQPANEAMQYTVHECRDKQMQMQASTCSFNTLPIQSTDISRNADGGTMHNKCYSIPPPHHVPSNQFSFVHGEHRMKSQREVLPPLPYSNDYHFVPSMKREFGYENHERLKPPSCDYQEIWNVPPSYGPWYHDRGVTAPYGCHPNEPASFPGHGWRFPPPALNYRDSLPFRPHYEDAIPVANRGPSIWQPR 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02079 1391 SMART 558neu5 844 975 IPR006569 -
Vian2g02079 1391 CDD PWWP_HULK 25 113 - -
Vian2g02079 1391 MobiDBLite consensus disorder prediction 415 436 - -
Vian2g02079 1391 FunFam Enhancer of ag-4 2 841 980 - -
Vian2g02079 1391 Gene3D - 842 981 IPR008942 -
Vian2g02079 1391 Pfam PWWP domain 25 107 IPR000313 -
Vian2g02079 1391 SUPERFAMILY Tudor/PWWP/MBT 20 122 - -
Vian2g02079 1391 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Vian2g02079 1391 Gene3D - 3 108 - -
Vian2g02079 1391 ProSiteProfiles CID domain profile. 837 978 IPR006569 -
Vian2g02079 1391 MobiDBLite consensus disorder prediction 1107 1164 - -
Vian2g02079 1391 MobiDBLite consensus disorder prediction 1112 1155 - -
Vian2g02079 1391 SMART PWWP_4 22 79 IPR000313 -
Vian2g02079 1391 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1078 - -
Vian2g02079 1391 Pfam CID domain 845 968 IPR006569 -
Vian2g02079 1391 MobiDBLite consensus disorder prediction 422 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02079 Vian-Chr2 40490059 40502003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02079 - - pvu:PHAVU_001G148900g 2206.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02079 2 40490059 40502003 Vian2g02079 2 40490059 40502003 ECH
Vian2g02079 2 40490059 40502003 Vian3g01910 3 22454293 22470805 PCT