Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01883 ATGGAGCTCAGTAAACTCACCCTAGAGATCTTCTCCAAACTTGAACACAAATGGCTCTCACATTGTAAACCCAACCACAAAACCCGCATTCTCAGCATTGACGGCGGAGGTACCACCGCCATTGTCGCCGGCCAAGCTCTCATCCACCTCGAGGATCAGATCCGTCTCCGCACCTCCGATCCCCAAGCTCAGCTCGCCGATTTCTTCGACATCGTCGCCGGCACTGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGACGCCTTCGGTAGGCCGATGTATACAGCCAGAGAAGCCGTCCGTCTAGTCTCCGAGAGGAACTCCGAACTCTACAAGTTCAAATCCGGAGGCGTGTTCCGCCGGCGCCGGAAAATCTCCTCCAGAAGCATGGACAATGTGTTGAAGCAACTGTTCCAGAGGAAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTTCTTATCCCTTGCTTCGACCTCAAGAGTTCCGCTCCGTTCGTCTTTTCGCGCGCCGACGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGAGCACGTGCTCCACACCATCGGTGGTTGACATTGTGCTCGACGGCGTTTCCGAGACCATTGACCAGATGTTGGGTAACGCCTTCTGTTGGAACCGTACGGACTACGTCAGAATCCAGGCCTTTGGTTTGGGAAGCAAAGCAATGAGAAAGGAGGAGGTGCTCAAAGAGAGAGGACTGGAGTCGTTACCGTTTGGCGGGAAGCGCTTACTGACGGAGACTAACGGAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGCAACCGCAAAACCAAGCCCGCCGTCTAGTCCGTGCAAGGATTCCGCCGTCAACTCTCTCGCTAACGGCCGCTAG 903 0.557 MELSKLTLEIFSKLEHKWLSHCKPNHKTRILSIDGGGTTAIVAGQALIHLEDQIRLRTSDPQAQLADFFDIVAGTGIGAILAAMITAGDAFGRPMYTAREAVRLVSERNSELYKFKSGGVFRRRRKISSRSMDNVLKQLFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKSTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSKAMRKEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVATAKPSPPSSPCKDSAVNSLANGR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01883 300 MobiDBLite consensus disorder prediction 284 300 - -
Vian3g01883 300 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 224 IPR002641 GO:0006629
Vian3g01883 300 PANTHER PATATIN-LIKE PROTEIN 6 189 290 - -
Vian3g01883 300 SUPERFAMILY FabD/lysophospholipase-like 27 202 IPR016035 -
Vian3g01883 300 Gene3D Cytosolic phospholipase A2 catalytic domain 16 198 - -
Vian3g01883 300 Pfam Patatin-like phospholipase 31 189 IPR002641 GO:0006629
Vian3g01883 300 MobiDBLite consensus disorder prediction 278 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01883 Vian-Chr3 21944879 21946160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01883 194 300 Acyl Lipid Metabolism Gene Families AT3G63200 72.897 1.93e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01883 - - gmx:100795441 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01883 3 21944879 21946160 Vian3g01883 3 21944879 21946160 ECH
Vian2g02109 2 40893557 40894828 Vian3g01883 3 21944879 21946160 PCT