Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01869 ATGCCACCTCGCCCTCCTCTCCTTCAGATTCCTTTGCATTGTGTTCTGTTTCCGCCATTGCTTACTCTCTGTTCTTCTCTCTGTAAAGCTTTCCTGGCCCAAGACGTTGGTCAAGAAGTGATTGGAGCAACAACTGTTCGCAGAGGGAGGAATACACTATCAAGAAAAGCAAAACAGTTGTACTTTAACGCAGAGAGAGCAAAGAGAAGGCACTCAGACAGAATGCGGCGAGGCAAGGTTAACTTTGATGCAGCTCAGGATACAGATGTGCATAACTATAGAATCTTTGCTGCTACTTGGAATGTAGCTGGAAAATCTCCTCCAAGTTATTTGAGTCTGGAAGATTGGCTTCACTCCTCTCCTCCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCTGGTAATGTTTTGGGGACGGAAGATAATGGCCCTGCCAGAAAGTGGCTAGCTCTTATTAGAAAGACCCTAAACAGTCTTCCTGGAACAAGTGGTGAATGCCACACTGCTTCACCACTTCCTGATCCTATTGTAGAGTTAGATGCTGATTTTGAAGGATCAATGAGGCAGAAGGCAACCTCTTTCTTTCATCGCCGGTCGTTTCAATCCTTCAGTCATAGTATGAGAATGGACAATGACATGTCACTTCCACAAGCATACCTTGATCGCCGCCTCAGCGTCTGTGACAGAATGATGTCTGGTCACAGAACAAGTGATTACGACCCCAACTATAGATGGGCTTCTTCGGACGATGAAAATGGCACTGGTGACTCCCCAGTTGCAACACAATATTCACCAATGACATGTAAAGGTTTTTTCTCTGTGGAGGATCGAGATAGACAGACAGGGCACTCAAGATACTGCTTGGTTGCGAGTAAACAAATGGTTGGAATATTTCTAACAGTTTGGGTGAAGAGCGATATAAGAGATGATGTTCACAACATGAAAGTATCTTGTGTTGGAAGAGGATTAATGGGATATCTTGGAAACAAGGGTTCAATATCAATCAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAGGAGGGTGATGAGCTAAGGAGAAATTCTGATGTAATGGAGATTCTGAGAAAGACAAGGTTTCCCCGAGTTCATGGCATGGGCGATGAGAGTTCTCCGCAGACAATTTTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATAACTGGAAGGATCTGTTAGAGAATGACCAGCTACATATAGAGCGCAGACAAGGTCGAGTTTTTGAAGGATGGAATGAGGGGAAAATATATTTCCCTCCCACGTACAAGTATTCAAACAACTCAGACAGATATGCAGGCGATGAAAGGCACTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGTAGAGGCCTCCGCCAATTATCTTATGTTCGTGGGGAATCAAGATTCTCAGATCATAGGCCAGTTTATAGCATGTTCCTGGCAGAAGTTGAGAATGCTGTAAAATATGTCGATCAACCCGCAATTGAGGACACTGAAGAAGCGAAGTGTACAATACAAGGATTTTTGGCTCTCAGTTTGCATACTTTCATGGAATATTTAGTGGGTAATGCTCTGGGGAACGCTAGCCCCAACGCTGCGGAGTTTGATTTTGCTTGCTATACAGAAAACTTGTCTTTTTGGCAGTTAAACACTCCTGGCTCAAATGCAAATAGCATCTGA 1800 0.435 MPPRPPLLQIPLHCVLFPPLLTLCSSLCKAFLAQDVGQEVIGATTVRRGRNTLSRKAKQLYFNAERAKRRHSDRMRRGKVNFDAAQDTDVHNYRIFAATWNVAGKSPPSYLSLEDWLHSSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTASPLPDPIVELDADFEGSMRQKATSFFHRRSFQSFSHSMRMDNDMSLPQAYLDRRLSVCDRMMSGHRTSDYDPNYRWASSDDENGTGDSPVATQYSPMTCKGFFSVEDRDRQTGHSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVHGMGDESSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHNWKDLLENDQLHIERRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSMFLAEVENAVKYVDQPAIEDTEEAKCTIQGFLALSLHTFMEYLVGNALGNASPNAAEFDFACYTENLSFWQLNTPGSNANSI 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01869 599 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 73 185 - -
Vian3g01869 599 SMART i5p_5 227 528 IPR000300 GO:0016791|GO:0046856
Vian3g01869 599 Gene3D Endonuclease/exonuclease/phosphatase 257 546 IPR036691 -
Vian3g01869 599 Gene3D Endonuclease/exonuclease/phosphatase 72 212 IPR036691 -
Vian3g01869 599 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 66 528 IPR045849 GO:0004445
Vian3g01869 599 FunFam Type IV inositol polyphosphate 5-phosphatase 7 261 541 - -
Vian3g01869 599 SUPERFAMILY DNase I-like 78 523 IPR036691 -
Vian3g01869 599 Pfam Endonuclease/Exonuclease/phosphatase family 98 512 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01869 Vian-Chr3 21702398 21706009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01869 289 528 Acyl Lipid Metabolism Gene Families AT1G65580 30.389 1.52e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01869 - - gmx:100797409 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01869 3 21702398 21706009 Vian3g01869 3 21702398 21706009 ECH
Vian2g02131 2 41163558 41168476 Vian3g01869 3 21702398 21706009 PCT