Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02131 ATGCATTTTAGCATGATGAAGGATGCGTCACCTCATGCAAAGCATAATACACTAATCCATGTGCTTGTGCAAAATGAGAAAACTGGCTTTTGTCTTCTTGGACATGATGAGAGAAAGCTACATGAAGTTGTGAGTTTTGTCCCAACAATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTTTTGGCCAAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCAGGCAGATGATGTTCTCTCCCAAGGGGTTGATGAAGAGTGTAGTAGCAACTACTCTGAGAGGGAGGCATGCACCATCAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCGGACAGAGTGCGAAGAGGTAAGAATGACCTTGATAAAGCTCAGGTTACAGATGTGTATAACTATAGAATCTTTGTTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCACACCTCTCCACCAGCTGATATCTATGTTCTTGGATTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGGAGGACCTTGAACAACCTTCCTGGAACAAGTGGAGGATGCCACACACCTTCACCCCTCCCTGATCCTATTGTAGAGCTAGATGCTGATTTTGAGGGATCAGTGAGGCAGAAGGCAACCTCTTTCTTTCAACGAAGATCCTTCCAATCCTTGAGCCGTAGTTTGAGAATGGATAATGATATGTTAATGCAACAAGCTTGCCTTGATCGTCGTTTCAGTGTCTGTGATAGAGTGATATTTGGTCACAGAGCGAGTGACTATGACCCCAATTATCGATGGGGTTCCTCAGATGAAGAAAATGGCGCTGGTGACTCTCCAATTACAGCACAGTATTCACCGATGTCATACGGTGGTTGTTTCTCTGCAGAGGATAGTGACAGACAGACAGGCCACTCAAGATACTGCTTGGTTGCTAGCAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAAAATGAAAGTGTCTTGTGTTGGCCGAGGGTTAATGGGATATCTCGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGTTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCCAGTCCACGACATGGGTGATGAGAATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTACCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAGAATGACCAGGCATCTGTGTATAGAGCAGAGGCAAGGGGCCTTCACCAATTATCATATGTTCGTGGGGAGTCAAGATTTTCTGATCATAGGCCAGTTTATAGCATATTCTTGGCAGAGGTTGAGTCTATTAGCTGCAACCAAATAAAGAAAAGCTCCAGTTCCAGGATTGATGTAGAAGAGTTGTTTCCAAATTCACATGGTTATGACTACACTGATTTGCACTACTTTTGA 1671 0.4243 MHFSMMKDASPHAKHNTLIHVLVQNEKTGFCLLGHDERKLHEVVSFVPTMRDENSKKSKLFWPKTLVKKWFNIKSKAEDFQADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRVRRGKNDLDKAQVTDVYNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNNLPGTSGGCHTPSPLPDPIVELDADFEGSVRQKATSFFQRRSFQSLSRSLRMDNDMLMQQACLDRRFSVCDRVIFGHRASDYDPNYRWGSSDEENGAGDSPITAQYSPMSYGGCFSAEDSDRQTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHKMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPVHDMGDENSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQASVYRAEARGLHQLSYVRGESRFSDHRPVYSIFLAEVESISCNQIKKSSSSRIDVEELFPNSHGYDYTDLHYF 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02131 556 Pfam Endonuclease/Exonuclease/phosphatase family 145 457 IPR005135 GO:0003824
Vian2g02131 556 SUPERFAMILY DNase I-like 132 528 IPR036691 -
Vian2g02131 556 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 120 232 - -
Vian2g02131 556 Gene3D Endonuclease/exonuclease/phosphatase 120 230 IPR036691 -
Vian2g02131 556 Gene3D Endonuclease/exonuclease/phosphatase 320 497 IPR036691 -
Vian2g02131 556 SMART i5p_5 274 524 IPR000300 GO:0016791|GO:0046856
Vian2g02131 556 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 67 488 IPR045849 GO:0004445
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02131 Vian-Chr2 41163558 41168476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02131 173 511 Acyl Lipid Metabolism Gene Families AT2G43900 22.727 1.23e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02131 - - gmx:100803074 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02131 2 41163558 41168476 Vian2g02131 2 41163558 41168476 ECH
Vian2g02131 2 41163558 41168476 Vian3g01869 3 21702398 21706009 PCT