Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01860 ATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCCGTCAATGTCCGCTCTCATGATGATATTTCAACACTTACAGCTGCAGCTGCCACAGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAGGTGTGGAATATTAACGCAGTGACTCCATTAGAGAGAGGAACAGGTATTGGAAGATGTGGTAAAAGCAAAAACAGTAATTCTAGCACCAGTGACAGTGGGGAGATTATGAATGGTGACAATGTTTTGGGTGCATGCAACCAAGAGCTCCTTGCTAGGGGCACTGCATTACTCAAACGGACGCGCAAAGGTGATCTTCACTGGAAAATAGTTTCAGTTTATATACATCGAACAGGCGAGGTAATGTTGAAAATGAAGAGCAGACACGTTGCAGGAACTATCACCAAAAAGAAAAAGAATGTTGTTTTGGATGTGTGCACAAATTTAGCTGCATGGCCAGGAAGGCATCTGGTTGATGAGGGTGAAGAAAGAAGATACTTTGGATTGAAGACAGAAGTAAGGGGAGTTGTGGAGTTTGAATGCAGAAATCAAAGAGAATATGATATTTGGACTCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCACGCAGACAAAACCTAAATGGGGTTTGA 654 0.4373 MGAERDHLASVVSSAVNVRSHDDISTLTAAAATALRGAATLKARALKEVWNINAVTPLERGTGIGRCGKSKNSNSSTSDSGEIMNGDNVLGACNQELLARGTALLKRTRKGDLHWKIVSVYIHRTGEVMLKMKSRHVAGTITKKKKNVVLDVCTNLAAWPGRHLVDEGEERRYFGLKTEVRGVVEFECRNQREYDIWTQGVSRLLSIVARRQNLNGV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01860 217 PANTHER EXPRESSED PROTEIN 1 209 IPR040269 -
Vian3g01860 217 MobiDBLite consensus disorder prediction 67 83 - -
Vian3g01860 217 Pfam Plant pleckstrin homology-like region 104 208 IPR013666 -
Vian3g01860 217 Pfam Auxin canalisation 1 60 IPR008546 -
Vian3g01860 217 MobiDBLite consensus disorder prediction 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01860 Vian-Chr3 21534923 21536299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01860 - - gmx:100811415 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01860 3 21534923 21536299 Vian3g01860 3 21534923 21536299 ECH
Vian2g02138 2 41278664 41281960 Vian3g01860 3 21534923 21536299 PCT