Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01859 ATGTGGAACCAGCCATACGGGAAAACTGATTTGGAGAGCGGGGCGCGGCCTCTGTATCCGATGATGCTGGAGAGCCCCGAACTGCGCTGGTCCTTCATCAGGAAAGTTGCGTCTCCTGACCTAATTGCTTTCAATTCCAAGCATCCCGTCAACTACCTACTCCTTGGGCTTTTCACTGTATCTCTTTCTTTTGTCGTTGGATTGAGTTGCGCCTTTACTAGCGAGAAAGTTATTCTGGAAGCTGTAATACTGACCGCCGTGGTGGTGATTGGTCTGACTCTCTACACATTTTGGGCTGCAAGGAGAGGCCAAGATTTCAACTTCCTTGGCCCCTTCTTGTTCGGTGCTGTGCTAGTTCTTATGGTCTTCGCTCTGATTCAGGTTCTGTTTCCATTGGGTAAGTTGTCTGTGATGATCTATGGGTGCTTGGCGGCTCTTATATTTTGTGGGTACATCGTATATGATACAGACAACCTGATTAAGAGATATTCGTATGATGAATTCATTTGGGCTTCGGTCTCTTTGTATCTGGACATCATCAATCTCTTCCTCTCTCTGCTCACTATTTTTAGAGCCGCTGATAATTAG 588 0.4643 MWNQPYGKTDLESGARPLYPMMLESPELRWSFIRKVASPDLIAFNSKHPVNYLLLGLFTVSLSFVVGLSCAFTSEKVILEAVILTAVVVIGLTLYTFWAARRGQDFNFLGPFLFGAVLVLMVFALIQVLFPLGKLSVMIYGCLAALIFCGYIVYDTDNLIKRYSYDEFIWASVSLYLDIINLFLSLLTIFRAADN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01859 195 PANTHER BAX INHIBITOR-RELATED 44 192 IPR006214 -
Vian3g01859 195 Pfam Inhibitor of apoptosis-promoting Bax1 45 190 IPR006214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01859 Vian-Chr3 21531746 21533543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01859 2 194 Miscellaneous Gene Families AT1G03070 62.195 4.46e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01859 K24205 - gmx:100785575 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01859 3 21531746 21533543 Vian3g01859 3 21531746 21533543 ECH
Vian2g02139 2 41282667 41284679 Vian3g01859 3 21531746 21533543 PCT