Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02139 ATGTTCATGAAAAGAGACGTTGAGAGCGGTGGTGGAGGTGACAGACCCCTCTACCCCAACATGCTCGAGAATCCTCAATATCGTTGGTCCTTCATACGCAAGGTTTACTGCATCCTCACCTTCCAATTGCTTCTCACCGTCGCCGTCGCCGCCGTTGTTGTCTTCGTCCGCCCCATCCCCCACTTCATCGTTTCCACCACCCCAGGCCTTGTTCTCTACTGTGTCCTCATCTTCATTCCTTTTATCATGGTGGTGATCAGCCTAACTATCTACACCTTTATTGCCGCAAGGAGAGGCCATGATTTCAACTTTTTGGGCCCATTCTTGTTTGGAGCCTTGCTAATTCTTATTGCCTTTTCCCTGATACAGATTCTATTTCCATTGGGTAAGCTTTCATTGATGATCTACGGGGGCCTGGCATCACTTATATTTTGTGGCTACATCATATATGACACAGACAACCTCATAAAGAGGTTCTCCTACGATCAGTACATATGGGCTTCGGTATCCTTGTATTTAGACGTCATCAACCTCTTCCTTTCTCTGCTTACTCTCGGTAGAGCTGCTTCTAGCTAA 576 0.4688 MFMKRDVESGGGGDRPLYPNMLENPQYRWSFIRKVYCILTFQLLLTVAVAAVVVFVRPIPHFIVSTTPGLVLYCVLIFIPFIMVVISLTIYTFIAARRGHDFNFLGPFLFGALLILIAFSLIQILFPLGKLSLMIYGGLASLIFCGYIIYDTDNLIKRFSYDQYIWASVSLYLDVINLFLSLLTLGRAASS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02139 191 PANTHER BAX INHIBITOR-RELATED 82 185 IPR006214 -
Vian2g02139 191 Pfam Inhibitor of apoptosis-promoting Bax1 83 185 IPR006214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02139 Vian-Chr2 41282667 41284679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02139 2 190 Miscellaneous Gene Families AT1G03070 53.750 9.62e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02139 K24205 - mof:131155109 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02139 2 41282667 41284679 Vian2g02139 2 41282667 41284679 ECH
Vian2g02139 2 41282667 41284679 Vian3g01859 3 21531746 21533543 PCT