Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01839 ATGCCTTTTCCGATGAAAATTCAACCAATCGATTCTCAGGTCCCTTCCGAAGGGCCTCGGCTTGAGCTGGCCAAGCCGGTTGTGAAGTCGCGCCTGAAGCGGCTCCTTGAGCGTCAATTCTCCGGCGTTCTGAGAAATTCAGCGCCGGAAAAGATCTCCGGTGGCGAGGAACCGCACAACGGCTCCAGTGATTTCGAGCCGAGTTCGGCTTGTTTGGCGAAAATGGTGCAGAATTTCATAGAGGAGAGTCACGAGAAGCACTCCGTGTCGCACCGCAACCGCTGTAACTGCTTCAATAGCAACTACGACGATAGCTCTGACGAAGAATCAAACTCGCTGGGCGGTTACGGGGACTCGAATTACTCTTCCAGCGAGGCGTGCGAAACTCTCAAGGGTTTGGTAGCGTGCGCGAGCGTGCACGAGAGGGATTTGCTGGCGGACACTGCAAAGATAGCTGAGAAGAATAAGATCTGCAAACGCAAGGACACCTTCTGCAGAAAAATTGTGACTGACGGATTGTTAGCCCTTGGATACGATGTGTCAATTTGCAAATCTCGCTGGGAAAAATCTCCCTCTTATCCCGCGGGAGAATATGAATACATAGATGTGACGATGGGGAAAGATAGGGTTGTAATTGATATTGACTTTAGGTCAGAATTCGAGATTGCTCGATCGACCAAGTCCTACAAGACTGTTCTGCAGAACCTTCCTTACATATTCGTTGGCACATGCGATCGGTTGCAGAGTATCGTGAGCATCGTGTCAGAGGCAGCAAAGCAGAGTATGAAGAAGAAGGGAATGCATGTGCCGCCATGGAGAAGAGTTGAATATGTGAAAGCCAAGTGGCTCTCCCCTTACACGCGAACCACTTCCTTCAAAGACGAGAAGAAGGAAGAACAACAGCTTTTGAAAGAAAAACCAGTCACGGCTGAAGAAGTAGAAACTTCCAGCGAAGAAAACGGCACTGTGATCGAATGGAAGCCCCCGGAGCTGAAGCCCAAAGGTTCGCTTTCTGGCGTGAAGATCGTGACAGGTTTGGCTGGGGTTTTTGATGAGGATGATAACCCATAA 1071 0.4986 MPFPMKIQPIDSQVPSEGPRLELAKPVVKSRLKRLLERQFSGVLRNSAPEKISGGEEPHNGSSDFEPSSACLAKMVQNFIEESHEKHSVSHRNRCNCFNSNYDDSSDEESNSLGGYGDSNYSSSEACETLKGLVACASVHERDLLADTAKIAEKNKICKRKDTFCRKIVTDGLLALGYDVSICKSRWEKSPSYPAGEYEYIDVTMGKDRVVIDIDFRSEFEIARSTKSYKTVLQNLPYIFVGTCDRLQSIVSIVSEAAKQSMKKKGMHVPPWRRVEYVKAKWLSPYTRTTSFKDEKKEEQQLLKEKPVTAEEVETSSEENGTVIEWKPPELKPKGSLSGVKIVTGLAGVFDEDDNP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01839 356 NCBIfam uncharacterized plant-specific domain TIGR01615 166 289 IPR006502 -
Vian3g01839 356 Pfam PDDEXK-like family of unknown function 74 288 IPR006502 -
Vian3g01839 356 MobiDBLite consensus disorder prediction 294 330 - -
Vian3g01839 356 PANTHER OS03G0796600 PROTEIN 27 296 IPR006502 -
Vian3g01839 356 MobiDBLite consensus disorder prediction 47 67 - -
Vian3g01839 356 MobiDBLite consensus disorder prediction 294 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01839 Vian-Chr3 21170585 21171845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01839 - - gmx:100782749 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02154 2 41454303 41455579 Vian3g01839 3 21170585 21171845 PCT