Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02154 ATGCCTTTCACAATGAAGATTCAGCCAATTGATTCGCCCGGTCATGAAGAGGCCCTTCGGGTTGAGCCGGTGAAGCCGATGATGAAGTCGCGGCTGAAGCGACTCTTGGAGCGCCAGTTCTCTGGTGTCCTCCGCAATTCGGCGGCGGAGAAGATCGTGGCCGAGGAGCTGCCGCGTTCCGGCAAAGATGGTTTTTCTGATCTCGAACCGAGTTCAGTGTGTCTGGCGAAGATGGTGCAGAGTTTCATGGAGGGGAATCACGAGAAGCATTCCGGTGCCGTAAAAGGCGCCCGTAACCGCTACAGTAGCTTCGAGGATAGCTCTGACGCGGAAACGCTAGTGTTTAGTAGTTTCAGCGACTCGAGTTTTTCTTCCTCTGCTGAAACGCAGGAAATCCTCAAGGGTTTGGTGGCATGTACGAGTGTTTATGAGAGGAATTTGCTAGCGGACACTACAAAGATCATTGAGAAGAACAAGGCAACGTGCAAACGCAAGGACGATTGTTGCAGAAAGATCATCACTGAAGGGTTGTTGGCTGTCGGATACGACGCTTCTGTATGCAAATCTCGCTGGGAAAAATCAACTTTCTGCCCTGCCGGTGAATATGAATACATTGATGTGATAATAGGAAAGGAGCGGGTGGTGGTTGACGTTGACTTTAGATCAGAGTTCGAGATTGCTCGACCCACCAAGACATACAAAGCGATCCTCCATACTCTTCCTTACGTGTTCGTTGGCACGTGCGACCGGTTGCAGAGCATCGTGGCAATCGCTTCGGAGGCGGCGAAACTGAGTCTGAAGAAAAGGTGCATGCATGTTCCGCCGTGGAGAAAAGTAGAATACGTCAGAGCCAAATGGTTCTCCCCCTACACGTGCTCGCGTGGAGTCAAAGAGGAGACCGAAGAGAAAAAGCACCTTGTGGAAGCGTTGTTGTTAACTGCTGCTGCTGAATGCGATACTTCCCGTGAAGATTATGAAAAATCAAAGTCAAAGTTGGTGTCTAAGAAGCCACTGGAGATGAAACCCAAGAGCTCACAGTCCGGTTTGGCAGCTGTGTTCCATGAAAAGCCGTAA 1074 0.5037 MPFTMKIQPIDSPGHEEALRVEPVKPMMKSRLKRLLERQFSGVLRNSAAEKIVAEELPRSGKDGFSDLEPSSVCLAKMVQSFMEGNHEKHSGAVKGARNRYSSFEDSSDAETLVFSSFSDSSFSSSAETQEILKGLVACTSVYERNLLADTTKIIEKNKATCKRKDDCCRKIITEGLLAVGYDASVCKSRWEKSTFCPAGEYEYIDVIIGKERVVVDVDFRSEFEIARPTKTYKAILHTLPYVFVGTCDRLQSIVAIASEAAKLSLKKRCMHVPPWRKVEYVRAKWFSPYTCSRGVKEETEEKKHLVEALLLTAAAECDTSREDYEKSKSKLVSKKPLEMKPKSSQSGLAAVFHEKP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02154 357 PANTHER OS03G0796600 PROTEIN 29 299 IPR006502 -
Vian2g02154 357 Pfam PDDEXK-like family of unknown function 77 291 IPR006502 -
Vian2g02154 357 NCBIfam uncharacterized plant-specific domain TIGR01615 170 291 IPR006502 -
Vian2g02154 357 MobiDBLite consensus disorder prediction 336 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02154 Vian-Chr2 41454303 41455579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02154 - - gmx:100796711 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02154 2 41454303 41455579 Vian2g02154 2 41454303 41455579 ECH
Vian2g02154 2 41454303 41455579 Vian3g01839 3 21170585 21171845 PCT