Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01601 ATGGCTTCAATCTTTTCACCTCTCACCACTATCTTCTTCTTCCTCATAGTGCTCTGGGGTGGCGAGGCTCGTGACCCTTTTGCGTGTGACCCAAAGAACGCCGCCACAAGGGGCTTACCCTTTTGCAAGGCGTCGCTGGCTATAGCAGAGAGGGTGAAGGACCTGATTGGAAGGTTGACAGTGGAAGAAAAAGTGAGCTTGCTGGTGAACAATGCGGCGGCAGTTCCACGGCTTGGAATCAAAGGCTATGAGTGGTGGTCGGAGGCACTGCATGGGGTCTCAAATGTGGGCCCCGGAACCAAGTTTGGCGGCCAGTTTCCCGCCGCCACCAGCTTCCCTCAAGTCATCACCACCGCTGCTTCTTTCAACGCTTCTTTATGGGAAGCTATTGGACAGGTGGCCTCCGACGAAGCAAGAGCAATGTACAACGGAGGAACGAGTGGGCTTACATACTGGAGCCCAAACGTGAACATTTTTAGAGACCCAAGGTGGGGCCGGGGACAGGAGACTCCCGGTGAAGACCCATTACTAGCCGGTAAGTATGCGGCAAGTTACGTGAGGGGATTACAGGGGAGCGACGGTGACCGGTTGAAGGTGGCTGCCTGTTGCAAACACTTTACGGCTTATGACCTTGATAATTGGAAGGGTGTGGATCGGTTTCACTTCAATGCAGAGGTTAGCAAGCAGGATATGGAGGAGACGTTCAACGTGCCATTCAGGATGTGCGTTAAGGAAGGAAACGTGGCGAGTGTGATGTGTTCTTACAATCAGGTTAACGGTGTTCCCACCTGTGCCGACCCCGTTAAAGACTACCGTTCGAAGCCTCTGGGGTCTTAA 837 0.5341 MASIFSPLTTIFFFLIVLWGGEARDPFACDPKNAATRGLPFCKASLAIAERVKDLIGRLTVEEKVSLLVNNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGQFPAATSFPQVITTAASFNASLWEAIGQVASDEARAMYNGGTSGLTYWSPNVNIFRDPRWGRGQETPGEDPLLAGKYAASYVRGLQGSDGDRLKVAACCKHFTAYDLDNWKGVDRFHFNAEVSKQDMEETFNVPFRMCVKEGNVASVMCSYNQVNGVPTCADPVKDYRSKPLGS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01601 278 PANTHER SUGAR HYDROLASE-RELATED 24 267 IPR044993 GO:0009044|GO:0045493
Vian3g01601 278 Gene3D - 32 270 IPR036962 GO:0004553|GO:0005975
Vian3g01601 278 Pfam Glycosyl hydrolase family 3 N terminal domain 105 267 IPR001764 GO:0004553|GO:0005975
Vian3g01601 278 SUPERFAMILY (Trans)glycosidases 39 267 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01601 Vian-Chr3 17581567 17583843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01601 8 267 Glycoside Hydrolase AT1G02640 80.534 1.21e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01601 - - gmx:100798630 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01601 3 17581567 17583843 Vian3g01601 3 17581567 17583843 ECH
Vian2g02837 2 49252312 49256906 Vian3g01601 3 17581567 17583843 PCT