Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01593 ATGGCAACAATAGCAGGTGGTGTCAGTCTTTCGAGCCCAAGGAGAGTATTTGCTAATGCCAAGGGATCAAACTCTGCGCCAAAGGCCCAGGCAATTAGCTTCCCACTCTTCAGGCCCACACATAAATGGCCCGCTTTGGTAGGGGTGGGGAAGGCCCGGCTCATTCGTGCAACGCCGGAAAAGATAGCGGATAAGGTGGAGGAGAGCATAAAGAGCGCGGAGGAGACCTGCTCGGGAGGCGGGACTGACGCGGAATGCGCGGCGGCTTGGGATGAGGTGGAGGAGCTGAGCGCTGAGGCGAGCCACGCCAGAGCGAAGCAGAAGGAGTCTGACCCGCTGGAGAGCTACTGCAAGGATAACCCCGAAACCGATGAGTGCCGCACTTATGATAATTAA 396 0.5732 MATIAGGVSLSSPRRVFANAKGSNSAPKAQAISFPLFRPTHKWPALVGVGKARLIRATPEKIADKVEESIKSAEETCSGGGTDAECAAAWDEVEELSAEASHARAKQKESDPLESYCKDNPETDECRTYDN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01593 131 MobiDBLite consensus disorder prediction 97 131 - -
Vian3g01593 131 Pfam CP12 domain 62 130 - -
Vian3g01593 131 SMART CP12_2 62 131 IPR003823 -
Vian3g01593 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 7 131 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01593 Vian-Chr3 17471217 17471612 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01593 - - gmx:100814289 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02829 2 49186451 49186849 Vian3g01593 3 17471217 17471612 PCT