Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02829 ATGGCAACCATGACTGGTGTGAGTCTTTCAAGCCCCAGAGTTTTGTTCAACGCATCTGGCTCACCCAAAAATGCGCACGCCTTAAAATTCGCACTTCCACTGCGCCAACCTATGCGACCGGGTGGTGTCCAGGTGGGTCGGGTGCTGAGGATCCAACCCGTTCGCGCGGCGCCGGATAAGATATCGGAGAAGGTGGAGGAGAGCATAAAGCACGCGCAGGAAGCGTGCGCGGGCGATCCGACAAGCGGCGAGTGTGTGGCGGCATGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAAAGACGCGAGGGACAAGCAAAAGGAAAAGGATTCGGACCCTCTGGAGACCTACTGCAAGGACAACCCGGAAACCATAGAGTGCAAAACTTTCGATGAATGA 399 0.5764 MATMTGVSLSSPRVLFNASGSPKNAHALKFALPLRQPMRPGGVQVGRVLRIQPVRAAPDKISEKVEESIKHAQEACAGDPTSGECVAAWDEVEELSAAAKDARDKQKEKDSDPLETYCKDNPETIECKTFDE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02829 132 Pfam CP12 domain 61 131 - -
Vian2g02829 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 4 131 IPR039314 -
Vian2g02829 132 MobiDBLite consensus disorder prediction 97 119 - -
Vian2g02829 132 SMART CP12_2 61 132 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02829 Vian-Chr2 49186451 49186849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02829 - - gmx:100812168 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02829 2 49186451 49186849 Vian3g01593 3 17471217 17471612 PCT