Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01481 ATGGCCAAGGAAGCTTCTCTGTGCCTCTTGTTTCTCTTCTTGCTCATTATCTCCTGTTCTGGATCTCTGGTGGGTTTTTCCTACCGTGAGAGGGGAGACACTTCAACATCTGCTAAAATCATATCGCTCCTCCAGCAGAAGAACGTTTCCATGTCTCAGATTCGAATTTTTGTTACAGATCATAGGATTTTGAGCAGTCTCAGCAATTCCATCGTGCCAACTGATTTGTACTTGAACAGAAGTCAAGTTCAAAGTTTAATTACTTCAAAACCCTCCAAACTAAAAGCCCGTCTACTTAACTTTCTCCCACATTCACACATCAAAAGCATCATTGCTAGCTGTGGCAGTGAGTGCTTAGCACAAAATGAGATGCCTTTGTTCTCACGTGCTTTGAAATCAATTAGTTCAGTTCTCAGAGAGCTTCATATAGGGAGGGAGGTAAAAATCTCAGTAGCATTTCCACTTTCATACTTAGAAAAGTTGAACACATCGCATGAAAATAGTATTCGCAGAATTATTTCATTCATAAGGGAAATGGAATCCTTTGTCATGGTAGAAGACAGCATTGATGGAGAATTAAGCATGGAGAGTCACTTTGATCAGGCTATAATCAAACGAGCCACTCTTGCTGCTTCCATTCTTCCTTGCAAAGATGTTCCTATTGTTTTAACAATGAAGAGCATAGTTGCCTCCACTTCAATGGAGTTAGTTCAATTCAGTGAGAGGGTATCCAAATATCTAGAAGCAAAAGCTCATATTACTAAAAGAATAGCTGCATTATATGCAGAGGTTCATATAACAGAAGATTTAGCAAGTAAAGAACTCAAAAGGGAAGAGGAAGAACTGTTTCCTGTCTCCCGCAGAGACATGCTAAGTGAATCCCACAAAAGGAGAAGTCTAGATGATACAACCAGTCCAACAAACGTAGTTTTCCCCACAAATCCAGCATCATCCACTCCAATAATCACACCCCCAGATACACCAACCATCATCACAGTTCCTGCCACAAATCCTGTCACAATTTCCCCTTCCAATCCTGCCGGAGTGCCTGTCACAGTTCCTTCTACCACACCTGTGACTTTTCCTCCCACAAATCCAGCCAATACACCAGTACCAGTGAGCAATCCGGCTACAACAACTCCTGTAGGGATACCACCCCCAACAACCAACCCTGTGACTTCTCCACCTTCATCAGGAAATGTTCCTGTCACAAATCCCCAACCTCAACCACCTCCTGCAAGCACTAATGCTCCCGCCATTCAGGGGCAGAGTTGGTGTGTGGCAAAGCAAGGAGCTCCTGAAGCTTCTCTTCAAGCAGCACTAGACTATGCTTGTGGAATGGGTGGGTCAGATTGTTCTCAAATTCAGCAGGGTGGGAATTGTTACAGTCCAGTTACATTGCAGAACCATGCCTCTTTTGCCTTCAACAGCTACTATCAAAAGAATCCAGCTCCAACAAGCTGCGACTTTGGAGGGACTGCCACCTTAGTTAACACAAATCCAAGTTCGGGTTCATGCGTTTTCCTATCCTCGTCGTCATCAACAACAGCATCTCCAAAGTCATCACCCCCAACACCACCTACACAATCAAGTCCAACACTACTACCACCACCAAGTCCAGTAACACCTACATCAATTCCAACAGCACCACCAACAACATCAGTAACAGGCCCATTTGGGTATGGCACCCCACCTTCAGTGTTAAATTCAAGCAACCCCGCGTCAGGTACAATGCCAGATTTTGGATATGAAAGCCCTCCTGTTGTAAATACAACATCAGCCTCGCATTCTATGAGCTTGAGACCTTCTGCTGGCTGCATTCTTCTGATGGTATCATTTGTCACTATGAGACTTGCTATGCATCCATAG 1869 0.4403 MAKEASLCLLFLFLLIISCSGSLVGFSYRERGDTSTSAKIISLLQQKNVSMSQIRIFVTDHRILSSLSNSIVPTDLYLNRSQVQSLITSKPSKLKARLLNFLPHSHIKSIIASCGSECLAQNEMPLFSRALKSISSVLRELHIGREVKISVAFPLSYLEKLNTSHENSIRRIISFIREMESFVMVEDSIDGELSMESHFDQAIIKRATLAASILPCKDVPIVLTMKSIVASTSMELVQFSERVSKYLEAKAHITKRIAALYAEVHITEDLASKELKREEEELFPVSRRDMLSESHKRRSLDDTTSPTNVVFPTNPASSTPIITPPDTPTIITVPATNPVTISPSNPAGVPVTVPSTTPVTFPPTNPANTPVPVSNPATTTPVGIPPPTTNPVTSPPSSGNVPVTNPQPQPPPASTNAPAIQGQSWCVAKQGAPEASLQAALDYACGMGGSDCSQIQQGGNCYSPVTLQNHASFAFNSYYQKNPAPTSCDFGGTATLVNTNPSSGSCVFLSSSSSTTASPKSSPPTPPTQSSPTLLPPPSPVTPTSIPTAPPTTSVTGPFGYGTPPSVLNSSNPASGTMPDFGYESPPVVNTTSASHSMSLRPSAGCILLMVSFVTMRLAMHP 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01481 622 MobiDBLite consensus disorder prediction 303 317 - -
Vian3g01481 622 Gene3D - 419 521 - -
Vian3g01481 622 MobiDBLite consensus disorder prediction 379 393 - -
Vian3g01481 622 MobiDBLite consensus disorder prediction 291 325 - -
Vian3g01481 622 FunFam Glucan endo-1,3-beta-glucosidase 4 419 512 - -
Vian3g01481 622 Gene3D Glycosidases 24 188 - -
Vian3g01481 622 PANTHER BETA-1,3 GLUCANASE 420 516 IPR044788 -
Vian3g01481 622 MobiDBLite consensus disorder prediction 520 547 - -
Vian3g01481 622 MobiDBLite consensus disorder prediction 357 418 - -
Vian3g01481 622 Pfam X8 domain 425 495 IPR012946 -
Vian3g01481 622 MobiDBLite consensus disorder prediction 548 578 - -
Vian3g01481 622 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vian3g01481 622 MobiDBLite consensus disorder prediction 401 415 - -
Vian3g01481 622 MobiDBLite consensus disorder prediction 508 583 - -
Vian3g01481 622 SMART X8_cls 424 508 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01481 Vian-Chr3 16167999 16170458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01481 386 508 Glycoside Hydrolase AT2G05790 49.206 1.74e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01481 - - gmx:100781884 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01481 3 16167999 16170458 Vian3g01481 3 16167999 16170458 ECH
Vian2g02736 2 48305181 48307583 Vian3g01481 3 16167999 16170458 PCT