Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02736 ATGGCCAAGGAACCTTCTCCATGTCTCTTCTTCCTCTCTTTTCTCATTCTCCTTTCTTCCGGAACTGCATCTTCACCCTCTGTTGATTCCTCATTCCTCCACCAAAGCAAGATCTTCAAATCTCAGATTCGGTTTTCTGTTTCTGACTACAAGATTTTGACCACTCTCACTGGCACCAACCTGTCAGTTGATTTCTTCTTAAACGAAAATTTTGTTTCTTCAAAATCATCTCCAGTTGCATGGATGAAAGTTCATCTTTTGAACATTCTTCCCCAAGTGGACATCAGCAGCGTCATTGTTAGATGTGGCAGTGAGTGCTTAGGCCGAGATGAGATGCCTTTGCTCATACCTGTTATGGAATCAATTCATTCGTTTCTCAGCAATCTTCAACTGGGGAGGGAAGTAAAAGTCTCCGTGGCATTTCCGCTTTCGTTCTTGGAGAATTTGAATGCATCATATGAAAATGATCTTCTCAAGATTGTTGCGTTTGTAAAGAAAATAGATTCATTTATCATGCTAGAAGACGCCAATGATGGGGAATTGGGAACTGGTCGATCTGTTATTGAAAGAACCACCCTTACTTCTATTTTTCCTTGCAAAGATGTCCCTGTGGTTTTCACAATCAAGAGCCGTGATATTCCCAGTTCAATGGAATTAACTCAGTTTAGAGGGGCAGTATCCAAATATCTTGGAGAAGGATCTCATTTTACTAAAAGGATTGCTGCGTTGTGTGCAGAAGTACAGACAACCAAAGGTTTTGTACTGGGAGATCTCAAAAGAGAAGAGGGAGAAGGGATAATTCCTTTGATCCTAAGAGAAAAGCCAAGCAAAGTCCACATCAGAAGAATTCTTCAAGTCACAAACAACTCACCTACCACAGTTTCCCCCACAAATCCAACCCCACCTGCACCAGTCATCTCACCTCCAGATACACCAACCATCATAACAGTTCCTTCCACCAATCCTGTCACAGTTTCCCCCACTAATCCAGGGGCCACACCTGTGACAGTTCCTTCTACCACACCAGCTTCTCCCTTAGCACCCACAAATCCAGCCAATCCAGGGCCTCAATCAGTTACCAACCCTGCTACGTCATTTCCACCCCCATCAGGAAATGGTCCTGTCACAAATGCCCTTCCTCCTCCTCCAAACACAAATGCTCAAGCCTCGCCTGGGGGCCAGAGTTGGTGTGTGGCAAAGACTGGAGTTTCAGAAGCTACTCTTCAGACAGCATTGGACTATGCTTGTGGAATGCCAAGTGTAGATTGTTCACAAATACAGCAAGGTGGGAGTTGTTACAATCCAAATTCAATACAAAACCATGCTTCTTTTGCCTTCAATAGCTACTACCAGAAGAATCCTGCGTCAACAAGCTGCGACTTTGGAGGCGCTGCAACCATAGTTAACACCAATCCAAGTTCGGGTTCTTGCATTTACCCATCTTCTTCAGGGACAGGCACATCCGGCTCTAATGGCTCACCTTCAGTTTTAGGATCCCAAAGCCCTCCTGATTTAAATACCTCAAATTCAGCTGGTCTGAGGCCTTCTATTAACTTTATGGTTCTGGTGGTATTATCCTTAGCCGGCATAAGACTCACTATATGA 1605 0.4417 MAKEPSPCLFFLSFLILLSSGTASSPSVDSSFLHQSKIFKSQIRFSVSDYKILTTLTGTNLSVDFFLNENFVSSKSSPVAWMKVHLLNILPQVDISSVIVRCGSECLGRDEMPLLIPVMESIHSFLSNLQLGREVKVSVAFPLSFLENLNASYENDLLKIVAFVKKIDSFIMLEDANDGELGTGRSVIERTTLTSIFPCKDVPVVFTIKSRDIPSSMELTQFRGAVSKYLGEGSHFTKRIAALCAEVQTTKGFVLGDLKREEGEGIIPLILREKPSKVHIRRILQVTNNSPTTVSPTNPTPPAPVISPPDTPTIITVPSTNPVTVSPTNPGATPVTVPSTTPASPLAPTNPANPGPQSVTNPATSFPPPSGNGPVTNALPPPPNTNAQASPGGQSWCVAKTGVSEATLQTALDYACGMPSVDCSQIQQGGSCYNPNSIQNHASFAFNSYYQKNPASTSCDFGGAATIVNTNPSSGSCIYPSSSGTGTSGSNGSPSVLGSQSPPDLNTSNSAGLRPSINFMVLVVLSLAGIRLTI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02736 534 Pfam X8 domain 396 466 IPR012946 -
Vian2g02736 534 Gene3D Glycosidases 19 174 - -
Vian2g02736 534 MobiDBLite consensus disorder prediction 320 343 - -
Vian2g02736 534 SMART X8_cls 395 479 IPR012946 -
Vian2g02736 534 MobiDBLite consensus disorder prediction 479 509 - -
Vian2g02736 534 MobiDBLite consensus disorder prediction 361 387 - -
Vian2g02736 534 FunFam Glucan endo-1,3-beta-glucosidase 4 390 483 - -
Vian2g02736 534 Gene3D - 392 487 - -
Vian2g02736 534 MobiDBLite consensus disorder prediction 320 393 - -
Vian2g02736 534 PANTHER BETA-1,3 GLUCANASE 391 490 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02736 Vian-Chr2 48305181 48307583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02736 340 481 Glycoside Hydrolase AT4G26830 41.250 2.18e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02736 - - gmx:100789503 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02736 2 48305181 48307583 Vian2g02736 2 48305181 48307583 ECH
Vian2g02736 2 48305181 48307583 Vian3g01481 3 16167999 16170458 PCT