Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01462 ATGAGTCAAGTTTCTGCAGAGATGAAGGCCAAATCTGAGGTGTACCATGGAGATGAACTGTGCCAAGAAAAGACCAAGTTGCTGCTGAAGGAGGTAGGGCTACCCAATGGGCTTTTGCCCTTGAAGGACATTGAAGAGTGTGGGTACGAGAAGGAAAGTGGGTTTGTGTGGCTGAAGCAGAAGAAGACCATAAACCACAAGTTTGAGAAGATTGGGAAGCTAGTGTCCTATGCAACTGAGATCACAGCCTTTGTTGAGGTTGGTAAGATAAAGAAGCTCACTGGTGTGAAGGCGAAGGAACTCTTGATTTGGGTGACACTGAATGAGATCTTTGTTGATGATCCACCCAGTGGGAAGATCACCTTCAAGACCCCTACAGCGTTGTTCAGGACATTCCCTGTCTCAGCTTTTGTGATTGAGGAGCCAGTTAAGGAGCTCAAGAATAAAGAAGAAAAAGAAGAAGAGAAGCAAGTGAAACAAGTTGGTAATGCTGTTGAAGTTCAAGAAGTTTGA 513 0.4483 MSQVSAEMKAKSEVYHGDELCQEKTKLLLKEVGLPNGLLPLKDIEECGYEKESGFVWLKQKKTINHKFEKIGKLVSYATEITAFVEVGKIKKLTGVKAKELLIWVTLNEIFVDDPPSGKITFKTPTALFRTFPVSAFVIEEPVKELKNKEEKEEEKQVKQVGNAVEVQEV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01462 170 SUPERFAMILY At5g01610-like 4 141 IPR036758 -
Vian3g01462 170 Gene3D - 4 150 IPR036758 -
Vian3g01462 170 PANTHER T31J12.3 PROTEIN-RELATED 10 138 IPR007493 -
Vian3g01462 170 Pfam Protein of unknown function, DUF538 28 137 IPR007493 -
Vian3g01462 170 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01462 Vian-Chr3 16021436 16021948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01462 - - pvu:PHAVU_007G202800g 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01462 3 16021436 16021948 Vian3g01462 3 16021436 16021948 ECH
Vian2g02718 2 48129505 48129990 Vian3g01462 3 16021436 16021948 PCT