Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02718 ATGGCTCTGGTAGCAGAGGATGTCAAGAGCAGATCGGAGGTGTACCACGGGGACGAAATCTGCCAAGTGAAGTCGAAAGAGCTACTCAAGGAAATCGCTCTCCCCAATGGTCTCTTGCCCCTCAAAGACATAGAAGAGTGCGGGTACGACCGAGAAACCGGCTTCGTCTGGCTCAAACAGAAGAAGAGTTACACTCACAAGTTCGAAAAAATCGGTAAACTTGTGTCCTACGCGCCCGAGGTCACTGCTCGTGTAGAAAAGGGAAAGATCTCCAAGCTCACCGGTGTGAAGACGAAGGAGCTCTTGCTCTGGATCACGCTCAGTGACATCTACGTCGATGACCCTCCCACCGGCAAAATCACCTTCAAAACCCCCGCTGGGCTATTTCGGTCTTTTCCCGTCTCCGCCTTCGAGATTGAGGAGGAGGCTCAGGCGAGTAAGCGCGTGGAGGAGCCAGCTGCGGCTGTGCAAGTCAAAGAGGTCTGA 486 0.537 MALVAEDVKSRSEVYHGDEICQVKSKELLKEIALPNGLLPLKDIEECGYDRETGFVWLKQKKSYTHKFEKIGKLVSYAPEVTARVEKGKISKLTGVKTKELLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIEEEAQASKRVEEPAAAVQVKEV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02718 161 Gene3D - 7 149 IPR036758 -
Vian2g02718 161 SUPERFAMILY At5g01610-like 5 142 IPR036758 -
Vian2g02718 161 PANTHER T31J12.3 PROTEIN-RELATED 13 140 IPR007493 -
Vian2g02718 161 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02718 Vian-Chr2 48129505 48129990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02718 - - gmx:100306660 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02718 2 48129505 48129990 Vian2g02718 2 48129505 48129990 ECH
Vian2g02718 2 48129505 48129990 Vian3g01462 3 16021436 16021948 PCT