Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01455 ATGGAGTCTTTGGTTGCTGAAACAGCCAAGAAGAAAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTATAATCCTTCTGAAAGATGGGGGCACTCTGCTTGTTTCTCTGGGGGGCTTATGTATGTCTTTGGGTTCCTGGTATTAACTTCTGAGTTGTTCATGATGCTTGTTACTGGGTTGGCCTCATTTATGGTGTCTGAATTTCTCATTAGTCTTACCTTTTTGGAGCTCTGCTATTTAAGAGATGGCTGTTGTGGAGGGCTACATTTCGGAGATGTTCTGTGTTTGGACCTTGTGAAAATGAATTGGAGCAAGCTTGGGACCACGGGTGAAAAGCCAGGTCCTAGAGATAGCCATGGTGCTGTTCTTGTAGGGCATAAAATGATAGTTTTCGGTGGCACCAATGGGTTAAAGAAGGTGAATGACACTCATATATTGGACCTTGTTACCAAAGAGTGGATTCGTCCTAAATGTGAAGGGACTCCTCCTTCACCAAGGGAAAGTCACACAGCTACTCTAGTTGGTGATGAAAGAGTAGTGATTTTTGGTGGCAGTGGTGAAGGTGACGGAAACTATTTAAATGATTTGCATGTTCTAGACCTTCGAACCATGAGGTGGACTTCTCCTCAGGTAAAAGGCGATTTGCCTGTCCCTAGGGACAGTCACAGCACTCTTGCAATCGGGAACAGGCTTTTTGTGTATGGTGGAGACTGTGGTGATCAGTATCAGGGCGATGTTAATGTGCTTGACATGGACACAATGACTTGGTCAAGGTTGAAAATTCAAGGATCTTCTCCAGGAGTCAGGGCAGGTCATGCTGCTGTCTACATCATTGGAGGGGTGGGAGATAAACGTTATTACAATGACATATGGGTGTTTGACATATGCACCTGTTCGTGGGCTCAGCTTGATTTTCGTGGTCAACCGCCACAGGGGCGATTTTCTCACACAGCTGTTGTGGCAGACATGGATATTGCCATATATGGCGGGTGTGGGGAAGATGAACGTCCTTTGAACGAGCTGCTAGTGTTGCAGCTTGGAGCAGAGCATCCAAATGGACGTTACAACATCTCCATGTGCAAAGTTTTTGGAACTTATTGGAATCAAGAAAAGAGGATCATACCTAGAGGAGCTGATACCAACTCGACAACTCCATGCACGGAGAACCATATGGAAGCCATAGGAAAATGGGCTAATGAAGTTGTGTTGGATAGAGTACAACCTTGTAACATCGATTCAGGCAGTTCACAACACAAGAGGAAGAGAATTGGTGTGGCAAAGGCGTGGGATGTTGAATCAGAACAAGAAGAACATTCTCTTTCACTGTCCCAGCATTCATCTCCTTCTCAATCTGATCAAGAACAGACCCCAGCTCAAAAAGCTAATGTTTCCATCATGGATTCTCAGAGGTATCCATGGTTCAAACAGATCAATAAAAGTCCAAGCTATTGCCAGCTCGACAATGACTCAAGCAACACCACATTTTTTAAGAATCTCACACAAAGAAGTGTCCATCCCATGAAACATCAACCTAAACAAGAGCAGTATGTTCACATTGATGATGATAGAAAAGTACCTCGACACACTCAACACCTGATCGGTGCTGAAGTTCGGGGAAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGTAGTTAATGGAAGAGTTTTCAGAGGAGTCTTATTTGCACCAGGTGCTACAGTATTGTCTACATGTGTTGAGCCAAACTGTTGTTTATCACGTTCATTTCCCTCCACTCAGCCATTTATGAACTCAAATGATGTGAGGGATTCGCAGCAAGCAACAGAGCCCTGCCATGGCTTCAGGCAACCTGTGGTAGCTCAAGCATCATCAGCAATCATGAGAGGCCCTACTTCTGCATCTTTAGCCAAAGAGCATCAAATGAGGAGTGACCTTCAAGGCTTGGTTTTGACTCTTGGAGGGCCTGCAAGTGCTAACCATGCTTCATCCTAG 1983 0.4473 MESLVAETAKKKAMWLYPKVLGYNPSERWGHSACFSGGLMYVFGFLVLTSELFMMLVTGLASFMVSEFLISLTFLELCYLRDGCCGGLHFGDVLCLDLVKMNWSKLGTTGEKPGPRDSHGAVLVGHKMIVFGGTNGLKKVNDTHILDLVTKEWIRPKCEGTPPSPRESHTATLVGDERVVIFGGSGEGDGNYLNDLHVLDLRTMRWTSPQVKGDLPVPRDSHSTLAIGNRLFVYGGDCGDQYQGDVNVLDMDTMTWSRLKIQGSSPGVRAGHAAVYIIGGVGDKRYYNDIWVFDICTCSWAQLDFRGQPPQGRFSHTAVVADMDIAIYGGCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTYWNQEKRIIPRGADTNSTTPCTENHMEAIGKWANEVVLDRVQPCNIDSGSSQHKRKRIGVAKAWDVESEQEEHSLSLSQHSSPSQSDQEQTPAQKANVSIMDSQRYPWFKQINKSPSYCQLDNDSSNTTFFKNLTQRSVHPMKHQPKQEQYVHIDDDRKVPRHTQHLIGAEVRGKVDGAFDSGLLMTAVVNGRVFRGVLFAPGATVLSTCVEPNCCLSRSFPSTQPFMNSNDVRDSQQATEPCHGFRQPVVAQASSAIMRGPTSASLAKEHQMRSDLQGLVLTLGGPASANHASS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01455 660 SUPERFAMILY Kelch motif 83 347 IPR015915 GO:0005515
Vian3g01455 660 MobiDBLite consensus disorder prediction 434 461 - -
Vian3g01455 660 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 14 596 - -
Vian3g01455 660 MobiDBLite consensus disorder prediction 440 461 - -
Vian3g01455 660 Gene3D - 14 159 IPR015915 GO:0005515
Vian3g01455 660 Pfam Kelch motif 115 154 IPR006652 GO:0005515
Vian3g01455 660 Gene3D - 160 400 IPR015915 GO:0005515
Vian3g01455 660 Pfam Galactose oxidase, central domain 177 227 - -
Vian3g01455 660 Pfam Galactose oxidase, central domain 228 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01455 Vian-Chr3 15935306 15938768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01455 15 445 Acyl Lipid Metabolism Gene Families AT3G05420 27.571 2.39e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01455 K20285 - gmx:100787222 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01455 3 15935306 15938768 Vian3g01455 3 15935306 15938768 ECH
Vian2g02715 2 48033746 48037651 Vian3g01455 3 15935306 15938768 PCT