Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02715 ATGAGTTCTTCGGCACCTCAACTTTCCAACAACAAAACAATGTGGCTGCATCCAAAGGTTTTGGGTTTCAATCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTCTCCAAGGGCCTTATGTATGTCTTTGGGGGTTGCTGTGGGGGGCTGCATTTTTGCGATGTTCTCACTCTGGACCTTACCAAAATGGTTTGGAGCAAGCTTACTACTACCGGTGAGAAGCCGGGGCCGAGAGATAGTCACAGTGCTGTTCTTGTGGGGAATAAAATGATAGTGTTTGGTGGCACGAATGGGTTCAAGAAGGTGAATGACATTCACATACTTGATCTTGTTACCAAAGAGTGGTTTCGACCTGAATGTAAAGGGACTCCTCCTTCTCCACGTGAAAGCCATACTGCCACGCTGGTTGGTGATGAAAGGATAGTGATATTTGGCGGTAGTGGAGAAGGTCATGCTAACTATTTAAATGATTTGCACATTCTTGATCTTCGAACCATGGGTTGGACTTCCCCTGAGTTGAAAGGTGATTTGCCGGTCCCCAGAGACAGTCATAGTACTCTTGCAATCGGGAACAAACTTATTGTGTATGGTGGAGATTCTGGTGATCAGTATCATGGCAATGTTCATATGCTTGATATGGCTACCATGACTTGGTCTAGATTGACGATTCAAGGTTCTCCACCAGGAGTCAGGGCAGGTCATGCTGCAGTTAACATTGGAACAAAGGTATATGTCATTGGAGGAGTTGGAGATAAACGTTACTATAACGACGTTTGGATCTTTGATATTTGCAATTTTTTGTGGACTCAACTTGATATACATTTTCAACAGCCACAAGGGCGATTTTCTCATACAGCTGTTGCTGCAGGCATGGATATTGCAATATATGGCGGATGTGGGGAAGATGAACGTCCTCTCAATGAATTGTTAGTGTTGCAGCTTGCAGCAGAGCATCCAAATGGACGTTACTACGTTCCGATGAGCAAACCTATTGGAACTTATTGGAATCACGAAAAGAATATTATCCCAGCAGAGGCGGATACTAACTCGGAAACTATCCTCGTGAGGAATAACGTGGAAGCTTTTGGAAATGGAGCTTATGAAATTGCATCAGAAAAATCGTCGCCTTATTACTTTGATTCAGGTACTTCGCGACAGAAGAGGAGGAGAATTGCTGCTGCAAAGGTATGGGATGTTGAATCAGAACAAGAAGATAGTTTTCTTTCGTTGTCTCTTCATTCATCTCCATATAAATCCGATCAAGAACAGACCCCAAGTCAAGAAGCAAACACATTCTTTCCAACCACTTCCCAACACGGAAATGACTCAAATTATAAGAGAACATTGATGAATGTCCCACTTAAGACTCCACAGGCTCTTCATTTCCTACAACATCAACTAAAACAGGAACAATGTCTTCATGTTAACGAGGACAGAAAAATAGCTCAACGTCAGGCTGCAGAGCGGAAACCAATGCTGCGACCCATTCAACACCTGATTGGTGGTGAAGTTCGGGAGAGAGTTGAAGGACCCTTTGAACCAGTTTCGGTATCTCCTACAGTTGTGAATGGAAGGATTTTCCGGGGAGTCATATTTGCACCTGGAGCAGGAGTTGTCTCAAAGGGGGCCAGTGTTAAACCGAATTGTCCTTCCTCTCAAGCCTTTTTGGGTACTTTAAGGGCTTCCCAGGAAGCACCAATTTGTTTGCATGCAGAGCCATACCATGGTTCACGATCAAGGCAAACCCCAGTGGCTTTACCATTTCCAATCATGGGAGCGACTCCTAGTGTTGTTTCCAAGGAGCATAAAATCAGGAATGATCTTCAAGGATTGGCTCTAACACTTGGAGGACCAGCCAGTGGAAATCCTCAGGTAAAATATTGA 1884 0.4427 MSSSAPQLSNNKTMWLHPKVLGFNPSERWGHSACFSKGLMYVFGGCCGGLHFCDVLTLDLTKMVWSKLTTTGEKPGPRDSHSAVLVGNKMIVFGGTNGFKKVNDIHILDLVTKEWFRPECKGTPPSPRESHTATLVGDERIVIFGGSGEGHANYLNDLHILDLRTMGWTSPELKGDLPVPRDSHSTLAIGNKLIVYGGDSGDQYHGNVHMLDMATMTWSRLTIQGSPPGVRAGHAAVNIGTKVYVIGGVGDKRYYNDVWIFDICNFLWTQLDIHFQQPQGRFSHTAVAAGMDIAIYGGCGEDERPLNELLVLQLAAEHPNGRYYVPMSKPIGTYWNHEKNIIPAEADTNSETILVRNNVEAFGNGAYEIASEKSSPYYFDSGTSRQKRRRIAAAKVWDVESEQEDSFLSLSLHSSPYKSDQEQTPSQEANTFFPTTSQHGNDSNYKRTLMNVPLKTPQALHFLQHQLKQEQCLHVNEDRKIAQRQAAERKPMLRPIQHLIGGEVRERVEGPFEPVSVSPTVVNGRIFRGVIFAPGAGVVSKGASVKPNCPSSQAFLGTLRASQEAPICLHAEPYHGSRSRQTPVALPFPIMGATPSVVSKEHKIRNDLQGLALTLGGPASGNPQVKY 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02715 627 SUPERFAMILY Kelch motif 53 315 IPR015915 GO:0005515
Vian2g02715 627 Pfam Kelch motif 231 271 IPR006652 GO:0005515
Vian2g02715 627 Gene3D - 8 119 IPR015915 GO:0005515
Vian2g02715 627 Pfam Galactose oxidase, central domain 39 85 - -
Vian2g02715 627 Pfam Galactose oxidase, central domain 139 189 - -
Vian2g02715 627 Pfam Galactose oxidase, central domain 87 135 - -
Vian2g02715 627 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 14 96 - -
Vian2g02715 627 Gene3D - 120 336 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02715 Vian-Chr2 48033746 48037651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02715 111 314 Acyl Lipid Metabolism Gene Families AT3G05420 33.180 8.87e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02715 K20285 - gmx:100796366 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02715 2 48033746 48037651 Vian2g02715 2 48033746 48037651 ECH
Vian2g02715 2 48033746 48037651 Vian3g01455 3 15935306 15938768 PCT