Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01142 ATGAATTCCTTTCAAGAATTTGACTCTTCGTCAAACTCCGACACCAAAGCCATCAACCTCTCAGCAGGTAACACCTCCAATTTCACATCACCACCACCACCTTCATCTTCGTCATCACCACCTTCCTCCTCCCCCACTACTCTGAGCCGCTACGAGAACCAAAAGCGACGCGACTGGAACACGTTCGGGCAGTACCTTCGGAACCACAGACCCCCACTTTCACTCTCACGCTGCAGCGGCGCACACGTGCTGGAATTCCTGAGGTACCTCGACGAGTTCGGAAAAACAAAGGTTCACACCCACCTTTGTCCCTTCTTCGGGCACCCCAACCCTCCTGCACCTTGCCCTTGCCCTCTACGCCAAGCATGGGGCAGCCTTGATGCTCTAATAGGTCGTCTCAGAGCTGCTTTCGAAGAAAATGGAGGAAAACCTGAAACCAACCCTTTTGGTGCTCGCGCCGTGAGACTTTACCTTCGTGAAGTGCGTGATTCACAAGCCAAGGCTAGGGGAATTAGCTACGAGAAAAAGAAACGCAAGCGTCCTCAACATCCTCCTCCATTGCCCCCTCCAAATAATGCAAGTTAA 585 0.5231 MNSFQEFDSSSNSDTKAINLSAGNTSNFTSPPPPSSSSSPPSSSPTTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDEFGKTKVHTHLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPQHPPPLPPPNNAS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01142 194 ProSiteProfiles ALOG domain profile. 50 177 IPR006936 -
Vian3g01142 194 MobiDBLite consensus disorder prediction 164 194 - -
Vian3g01142 194 MobiDBLite consensus disorder prediction 1 54 - -
Vian3g01142 194 PANTHER PROTEIN G1-LIKE2 30 182 IPR040222 -
Vian3g01142 194 MobiDBLite consensus disorder prediction 1 32 - -
Vian3g01142 194 Pfam ALOG domain 41 163 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01142 Vian-Chr3 12570740 12571652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01142 - - gmx:100806497 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01142 3 12570740 12571652 Vian3g01142 3 12570740 12571652 ECH
Vian2g02209 2 42168493 42169336 Vian3g01142 3 12570740 12571652 ECH
Vian3g01142 3 12570740 12571652 Vian2g02209 2 42168493 42169336 ECH