Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02209 ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCCGACAACACCTGCAACCTCATCACCAATACCACCACCACCAACTTAACCACAACTGCTTCCTCTTCCTCCGCTGCTTCCAACTCCATCGCCAGCAGCAGCCGCTACGAGAACCAGAAACGCCGTGACTGGAACACCTTCGGTCAATACCTCAAGAATCACCGACCCCCTCTCTCCCTCTCAAGGTGTAGCGGTGCACACGTCCTTGAATTCCTAAGGTACCTGGATCAATTTGGGAAGACGAAAGTGCACACACCGATCTGCCCCTTTTACGGGCACCCGAACCCTCCAGCACCTTGTCCATGTCCTCTCAGGCAAGCTTGGGGGAGCCTTGACGCTCTGATTGGACGGTTGCGTGCAGCTTTTGAGGAAAATGGAGGAAAGCCCGAGGCAAACCCTTTTGGAGCTCGAGCTGTGAGACTCTACCTTCGCGAGGTTCGTGATCTGCAATCCAAAGCAAGAGGAATTAGCTACGAGAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAACCCATGCCACTGCCTCATCATTCTCTCCCTCCTCCAGGTGCAAGTGCAACTCATTAG 609 0.5222 MDSNIQDFIDTCNSDNTCNLITNTTTTNLTTTASSSSAASNSIASSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQPMPLPHHSLPPPGASATH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02209 202 Pfam ALOG domain 40 161 IPR006936 -
Vian2g02209 202 ProSiteProfiles ALOG domain profile. 48 175 IPR006936 -
Vian2g02209 202 MobiDBLite consensus disorder prediction 166 202 - -
Vian2g02209 202 PANTHER PROTEIN G1-LIKE2 31 182 IPR040222 -
Vian2g02209 202 MobiDBLite consensus disorder prediction 31 50 - -
Vian2g02209 202 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02209 Vian-Chr2 42168493 42169336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02209 - - gmx:100527164 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02209 2 42168493 42169336 Vian2g02209 2 42168493 42169336 ECH
Vian2g02209 2 42168493 42169336 Vian3g01142 3 12570740 12571652 ECH
Vian3g01142 3 12570740 12571652 Vian2g02209 2 42168493 42169336 ECH
Vian2g02209 2 42168493 42169336 Vian3g02694 3 41732332 41732931 PCT