Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00431 ATGAACACATTTGGTTCAGAACTTGGAAGTAGTGGGTGTGAGTCTGGTTGGACTCTATACCTGGAGCAATCTTTCCTTAACCAGAATGCTTCTTCACATCAGGGTGGAACTGAGGGGTTCTTTGAAGAGGAACACAAGGACAAAAGATTCAAAGGTGAAGATTCTGGGGAGGAGGATTTGTCCATGCTTTCTGATGCTTCTTCTGGACCTCCTCTTTTTCCACACTACGACTCTTACTTCAAAGAAGATGTCAATGGTTGCTTCTATTCAGCTTCCAAGGCAGTCAAGCTGGCCAAGAGTGGTAAAAAGAAGCAGAAAGTTAAGGAAAATCAACACCTTGAGGATCAACATCTCACTTTTCTTCATGACACTGCTAGCTCTCCTGTCTTTGACTTTTCCACTGACAATGTTACAAGGGGCAACCAACAAACATCTGTAGGGAGTGTGGTTGATTATTCACAAGGTTTTTCTGCAACTTATTTTATGGGAAGATCGTCATTCCAAGAAGAACACTTCGGTTTCCTACAATCAGAAAATGAAGTTGAAGGCAGCAAATGGTATGGAGGGAAAAGAATGGGAATAAGGTGA 588 0.4218 MNTFGSELGSSGCESGWTLYLEQSFLNQNASSHQGGTEGFFEEEHKDKRFKGEDSGEEDLSMLSDASSGPPLFPHYDSYFKEDVNGCFYSASKAVKLAKSGKKKQKVKENQHLEDQHLTFLHDTASSPVFDFSTDNVTRGNQQTSVGSVVDYSQGFSATYFMGRSSFQEEHFGFLQSENEVEGSKWYGGKRMGIR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00431 195 PANTHER OSJNBA0091C07.3 PROTEIN 5 164 IPR044670 GO:0009690|GO:0009691
Vian3g00431 195 MobiDBLite consensus disorder prediction 30 67 - -
Vian3g00431 195 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00431 Vian-Chr3 4060114 4060951 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00431 - - pvu:PHAVU_007G046700g 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00431 3 4060114 4060951 Vian3g00431 3 4060114 4060951 ECH
Vian10g00034 10 267533 268329 Vian3g00431 3 4060114 4060951 PCT