Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00034 ATGAATGCATTGGCATCATCACAATGCAGCAGCGGGTGTGAGTCTGGTTGGACTCTATACCTGGAGCAATCTGTCCAGCTGAATCACAATGCCTTTTCACATGCAAGTTCCCAGTTTGATGGTGAAGATAACGACGAATACAAAGACAAGAAAGCCAAAAAGGAGGAGGCTGAGGAAGAGGACCTGTCCATGGTCTCTGATGCTTCTTCTGGGCCTCCACACTTGCCAGATGCACAAGATAATGGCAGCTTTTACTCTGCATCTAAGGCAGCAAAACTTGGCAAGAGAAGTAAGAAGAGGCAGAAGGTTAAGGAATACCAACACCTTCCTTCTTTTCTTGATGACACTGCTAGCTCTTCTGTCTTTGATTTCTCCATGAACAATGTCACAGTGACCAACCAACAAACTTCCACAGAGAGCATGCTAGATTACTCACAAGGTTTCTCTGCTACTTATTATGAGGAGAGATCCTCGTTGCAAGACCAGTTCGGCTTTTTAGAACCATCCCTGTCAGAAAATGGAGTTGAAAACAACAAGCAAATGCTTCTTCTGTACACTGGCCAATCTTCATGA 573 0.445 MNALASSQCSSGCESGWTLYLEQSVQLNHNAFSHASSQFDGEDNDEYKDKKAKKEEAEEEDLSMVSDASSGPPHLPDAQDNGSFYSASKAAKLGKRSKKRQKVKEYQHLPSFLDDTASSSVFDFSMNNVTVTNQQTSTESMLDYSQGFSATYYEERSSLQDQFGFLEPSLSENGVENNKQMLLLYTGQSS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00034 190 PANTHER OSJNBA0091C07.3 PROTEIN 6 162 IPR044670 GO:0009690|GO:0009691
Vian10g00034 190 MobiDBLite consensus disorder prediction 39 60 - -
Vian10g00034 190 MobiDBLite consensus disorder prediction 35 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00034 Vian-Chr10 267533 268329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00034 - - gmx:100818510 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00034 10 267533 268329 Vian10g00034 10 267533 268329 ECH
Vian10g00034 10 267533 268329 Vian3g00431 3 4060114 4060951 PCT